Panicum virgatum (switchgrass): 120647276
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Entry
120647276 CDS
T07260
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120647276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120647276
03036 Chromosome and associated proteins [BR:
pvir03036
]
120647276
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
120647276
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120647276
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
120647276
NCBI-ProteinID:
XP_039779945
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Position
9K:complement(67179193..67183889)
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AA seq
382 aa
AA seq
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MVSGVADNPDGDGGAQRPPPPVGAGAALGTPPVSAGAAHSASTSGGSAGSPSSRSEQHAP
DGAGKGAAPGAAAAASASASTPASESTFLRLNNLDINGDDAPSSLAPTSKKKKRGARAVG
PDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFTDPNNNIEAPDPDNPNAQQYDE
KNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEELKTELVGLKGRIEKKSSY
LQELQDQYVGLQNLIQRNEQLYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHF
DFNSTPFELHDDSYVLKEMLFCGREQHDSTQEPISNGGESSSMSNIYWEQVQHAGRPNNG
TVRLPGSPPIPGILKGRVKHEH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgtcgcggacaacccggacggggacggcggcgcccagcgcccgccgccg
cctgtgggggccggggccgcccttggcacgccgcctgtctccgctggcgccgcgcactcc
gcgtctactagcggggggagcgccggttccccgtccagccgcagcgagcagcacgccccc
gatggcgctggcaagggtgccgcccccggcgctgcggcggcggcgtcggcgtcggcgtcc
acgccggccagcgagagcacgttcctccgcctgaataatctcgacatcaacggcgacgac
gcgccgtcgtcgctggctcctacgagcaagaagaaaaagagaggcgcacgggcagtcggt
cctgataaaggtaaccggggactgcgccagtttagtatgaaagtttgtgagaaagttgaa
agtaaagggagaacaacatataatgaggtggcggatgaacttgtagctgagtttacagac
cccaataataatattgaggcaccagatcctgataatcctaatgcacaacaatatgatgag
aaaaatataagacgaagagtttacgatgctttaaatgttctgatggctatggacattata
tctaaagataaaaaggaaatccagtggaagggcttgccccggactagtataagtgatatt
gaagaattgaagacggagcttgtgggactaaaaggtaggattgagaagaaaagttcttat
ttacaggagctacaagatcaatatgtaggtctgcaaaatctgattcaacgaaatgagcaa
ttatatggttcgggaaacacaccttctggtggagtggctttgccatttatcctagttcag
acccggcctcatgcaaccgtggaagtcgagatatcagaagatatgcagttggtgcatttt
gatttcaatagcaccccatttgagttgcatgatgactcatatgtcctaaaagaaatgctg
ttctgtggaagagaacaacatgacagcactcaagagccaatctcaaatggaggtgagagc
tcaagcatgtcaaatatttactgggaacaggtacagcatgcagggcggccaaataatggc
acagttaggttaccaggctcaccgcctattccaggaatattgaaagggcgtgtgaagcac
gagcactag
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