Panicum virgatum (switchgrass): 120647318
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Entry
120647318 CDS
T07260
Name
(RefSeq) ribonuclease P protein subunit p25-like isoform X1
KO
K14525
ribonucleases P/MRP protein subunit RPP25 [EC:
3.1.26.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120647318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120647318
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120647318
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120647318
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
120647318
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
120647318
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
120647318
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
120647318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alba
Rpp20
Motif
Other DBs
NCBI-GeneID:
120647318
NCBI-ProteinID:
XP_039780012
LinkDB
All DBs
Position
9K:complement(67568545..67571718)
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AA seq
271 aa
AA seq
DB search
MDRYQRVEKPREESPIGANEIRITAQGRPRNYITYALALLQDNTVDDIVIKAMGRAINKT
VVIVELLKRRIAGLHQNTSIESIDITDTWEPLEEGLVTLETTRHVSLITIKLSKKELDTS
SPGYQPPIPADQVRPAAEFDQDAEAIPSGRGRGRGRRGRGRGRGIYLPGYTSYGFSNGAV
DYNDEFGEPEEAPHGNRGRGRGRGRRGSFGPGRGYGGDAYPMEEAGEYDDGYNAPPMQGY
EGGRGRGRGRGRGRGRGRGRGGRGRGPPPQE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggatcggtaccagagggtggagaagccgcgggaggagtcccccatcggcgccaacgag
atccgcatcacggcgcagggccggccacgcaactacatcacctacgcgctcgccctgctc
caggacaacacggtggatgacattgtcatcaaggctatgggaagggcgatcaacaagaca
gtcgtcatcgtggagcttcttaagagaaggattgctggtctccatcagaatacatctatt
gaatccattgacataactgatacttgggagccattggaagaaggccttgtcactctggag
accactcgccatgtatccttgattaccattaaattgtcaaagaaggagctggatacatcg
tctcctggttaccagccaccgataccagctgatcaggtcaggccagcagctgagtttgat
caggatgcagaggccataccaagtggtcgtggaagaggacgtggtcgtagggggaggggc
cgtggaagaggtatatatttgcctggttacacttcttatggtttcagcaatggagcagta
gactacaatgatgagtttggagaaccagaggaggctccacatggaaatcgtggcagaggg
aggggtcggggaaggcgtggatcttttgggcctggaaggggttatggtggtgatgcttat
ccgatggaagaagctggtgaatatgatgatggatataatgcaccacctatgcaaggatat
gaaggtggcagaggccggggccggggccggggccggggccgggggcgtggtcgtgggcgt
ggagggcgaggccggggacctcctccacaagagtag
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