Panicum virgatum (switchgrass): 120647348
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Entry
120647348 CDS
T07260
Name
(RefSeq) transcription factor MYB106-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120647348
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120647348
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
RRP7
TFIIA
NAP
Motif
Other DBs
NCBI-GeneID:
120647348
NCBI-ProteinID:
XP_039780046
LinkDB
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Position
9K:67928141..67929745
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AA seq
244 aa
AA seq
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MDAISSLMLQEGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAELTGLRRSGKSCRLRWVN
YLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHFKKARPSR
RARAQLLHQYQLQQQEQRRQYLQSLHLLHQHQQQQLQLLQQQSQQLMMTQQQSPPEPDHQ
AAVMAMVSNDDQQGSPASTAEHCTLPVPDDDDALLWDSLWKLVDGDGCADGSSGGEYYTA
RTPV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatcagcagcctgatgctgcaggaggggtggaggaaggggccatggacggcg
ctggaggacaggctgctcaccgagtacgtgcagcagcacggcgagggcagctggaactct
gtcgccgagctcacagggctgcggcggagcgggaagagctgccggctgcggtgggtgaac
tacctccggccggacctgaagcggggcaagatcacccccgacgaggagaccgtcatcctc
cagctccacgccatgctcggcaacaggtggtcggcgatcgcgcggtgcctgccggggcgg
acggacaacgagatcaagaactactggcggacgcacttcaagaaggcccggccgtcgcgc
cgcgcccgggcgcagctgctccaccagtaccagctccagcagcaggagcagcgccgccag
tacctccagagcctgcacctcctgcaccagcaccagcagcagcagctgcagctgctccag
cagcagagccagcagctgatgatgacccagcagcagagcccgccggagcccgaccaccag
gccgccgtcatggcgatggtcagcaacgacgaccagcagggcagcccggcgtcgacggcc
gagcactgcacgctcccggtcccggacgacgacgacgcgctgctgtgggacagcctgtgg
aagctcgtcgacggggacggctgcgccgacggctccagcggcggcgagtactacacggcg
cgtacgccagtgtaa
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integrated database retrieval system
