Panicum virgatum (switchgrass): 120647413
Help
Entry
120647413 CDS
T07260
Name
(RefSeq) 4-coumarate--CoA ligase-like 4
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
120647413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120647413
NCBI-ProteinID:
XP_039780127
LinkDB
All DBs
Position
9K:complement(68794961..68798605)
Genome browser
AA seq
547 aa
AA seq
DB search
MAPPPPVDPRSGYCAATRSFRSKRADVPLPADRDLDVVTFLASRRHAGTVALVDAATGRR
VTFADLWRAVAGAATALAAPPLSLRKGQAALILSPNSVHFPVAALAAMSLGAVLTTANPL
NTPAEIAKQVADARPVLAFTTRDLLPKLPAAGLRVVLLELERLPSDPAAVVATIGEISAT
TPDPARRRERVTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIITRFRLESSDRTEA
FLCTVPMFHVYGLVAFATGLLGCGATIVVLSKYELPEMLRAINEYGVTYLPLVPPILVAM
VAHPKPLPLGQLRKVLSGGAPLSKEIIEGFRDKYPQVEILQGYGLTESTAIGASTDSAEE
SRRYGTAGLLSPNTEAKIVDPDTGEALPVNRTGELWFRGPYVMKGYFKNTEATQSTLTPD
GWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEIADVAVIPFPDR
EVGQFPMAYVVRKKGSNLSDREVMEFVAKQVAPYKKVRKVAFVTEIPKNASGKILRKDLI
KLATSKL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccgccgccggtggacccgcgcagcggctactgcgccgccacgcgctccttc
cgcagcaagcgcgccgacgtcccgctccccgccgaccgcgacctcgacgtcgtcaccttc
ctcgcctcccgccgccacgcggggaccgtcgcgctcgtcgacgccgccacggggcgcagg
gtcaccttcgccgacctctggcgcgccgtcgcgggcgcggccaccgcgctcgccgccccg
ccgctctccctccgcaagggccaggccgcgctcatcctctcccccaactccgtccacttc
cccgtcgccgcgctcgccgccatgtccctcggcgccgtgctcaccaccgccaacccgctc
aacacgcccgccgagatcgccaagcaggtcgccgacgcgcgccccgtcctcgccttcacc
acccgggacctcctccccaagctccccgccgctggcctccgcgtcgtgctcctcgagctc
gagcgcctcccctccgaccccgccgccgtcgtcgccaccatcggggagatctccgccacg
acgcccgaccccgcgcgccgcagggagcgcgtcacgcaggacgaccccgccacgctgctc
tactcctcggggaccacggggcccagcaagggcgtcgtcgccacgcaccggagcctcatc
tccatggtgcagatcatcatcacgcggttccgcctcgagagctccgacaggaccgaggcc
ttcctctgcaccgtgcccatgttccacgtctacggcctcgtcgccttcgccacggggctg
ctcggctgcggcgccaccatcgtcgtgctctccaagtacgagctccccgagatgctgcgc
gccatcaacgagtacggggtcacctacctgccgctcgtgccgcccatcctggtcgccatg
gtggcgcaccccaagccgctgccgctcggccagctgcgcaaggtgctctccggcggcgcg
ccgctgagcaaggagatcatcgaggggttcagggacaagtacccgcaggtggagatcctg
caggggtacgggctcacggagagcacggccatcggcgcgtccacggactctgcagaggag
agccgccgctacggcacggctgggctgctctcgcccaacaccgaggctaagatcgtcgat
ccggacaccggtgaggcgctcccggtgaaccgcacaggcgagctctggttccgggggcca
tacgtcatgaaagggtacttcaagaacacagaggcaacacagtcaacgttgacacctgac
ggatggctcaagactggggacctctgctacatagacgaggatgggtatctcttcgtggtt
gatcgcctcaaagagctgatcaaatacaaagggtatcaggtgcctccggcagagttggag
gctcttttgctaacacatccggaaattgcagatgtcgctgttataccgtttcctgatcgt
gaggttggccagttcccgatggcctacgtagttaggaagaaggggagcaacttgtcagat
cgcgaggtgatggagtttgtggcgaagcaggtagcgccttataagaaggttaggaaggtg
gcatttgtgacagaaattcccaagaatgcgtccggcaagatactgaggaaggatctcatc
aagctcgccacatcaaaattgtga
DBGET
integrated database retrieval system