Panicum virgatum (switchgrass): 120647419
Help
Entry
120647419 CDS
T07260
Name
(RefSeq) epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1
KO
K07071
uncharacterized protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
120647419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
NAD_binding_10
NAD_binding_4
NmrA
3Beta_HSD
Pec_lyase_N
GDP_Man_Dehyd
adh_short
RmlD_sub_bind
Polysacc_synt_2
DUF6013
Semialdhyde_dh
Motif
Other DBs
NCBI-GeneID:
120647419
NCBI-ProteinID:
XP_039780141
LinkDB
All DBs
Position
1K:56750991..56757006
Genome browser
AA seq
377 aa
AA seq
DB search
MGFPTPFLQLKPKQPPVGGYPRSRRHMHLRCALNSENPPMTVSITGATGFIGRRLVQKLL
SDDHKVFVLTRSATKAASVFPVSTYPGVTIAEQGDWEACVRGSSAVVNLAGMPISTKWSP
EIKQEIKRSRVNVTSKVVKYINHAGNADVQPSVFVSATAIGYYGTSEVHSFDESSPSGND
YLAEVCREWEATARQVNQQDVRLVLLRIGVVLGKDGGALAKMIPLFMMFAGGPLGTGRQW
FSWIHLDDLVNLIYESLINPAYKGDVRRRPTRRTMSTATPVMASFLLLLLVASTATAHFQ
VGDVDEYWTKRAQEARLRNRAAGAAINDLISGAARFHANVDARVYGRRSNLQDAGEAPAK
PTEAQGAAAAQGGGGGH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccccacccccttcctgcagctgaagccgaagcagcctccggtcggaggatat
ccgcggtcgaggaggcacatgcacctgcgctgcgccctcaactctgagaatcctcccatg
actgtttccatcactggagccacaggtttcattgggcgcagattggttcagaagcttcta
tcggatgatcacaaggttttcgtcttaacaaggtctgccaccaaggccgcatcagttttt
cctgtttccacctaccccggagtcacaatagccgaacaaggagattgggaggcatgcgtg
agaggctcctctgctgttgtcaacttggccggcatgcccataagcacaaaatggtcacca
gagattaaacaggaaattaagcggagccgggtcaatgttacatcaaaggtggtgaaatac
ataaaccatgctggaaatgctgatgttcaaccctcagtgtttgtgagtgcgacagccatt
ggctactatggtaccagcgaagtccatagctttgatgaatcaagtccatctggcaatgac
tacctagcagaggtgtgcagagaatgggaggccacagcacgtcaagtaaaccagcaggat
gttagacttgtgcttctccggattggggttgttcttggcaaggacggtggtgctctagca
aagatgatccctctttttatgatgtttgccggtggtcctcttgggacgggacgccaatgg
ttttcttggattcatctagacgacctggtgaacctcatctacgaatctctaattaaccct
gcgtacaaaggggacgtacgccgccggccgacacgaaggacgatgtcgacagcgacgccg
gtgatggcgagctttctgctgctactgctggtggcgtcgacagcgacggcgcatttccag
gtcggcgacgtggacgagtactggaccaagcgcgcgcaggaggcccgcctcagaaaccgt
gccgccggggcggcgatcaacgacctcatctccggtgccgcgcgcttccacgcgaacgtg
gacgcgcgcgtgtacggccggcgctccaacctgcaggatgccggggaggcaccagccaag
ccgaccgaagcacaaggtgccgctgccgctcaaggtggtggcggtggccattga
DBGET
integrated database retrieval system
