Panicum virgatum (switchgrass): 120647446
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Entry
120647446 CDS
T07260
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
pvir04141
Protein processing in endoplasmic reticulum
Module
pvir_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120647446
00513 Various types of N-glycan biosynthesis
120647446
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120647446
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Motif
Pfam:
Ribophorin_I
Nmad5
OmpH
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
120647446
NCBI-ProteinID:
XP_039780175
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Position
9K:69229678..69234384
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AA seq
617 aa
AA seq
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MATPPLPLRRATPLLLLAVLVGALASTTRADLVITRADRRVDLTSHIVRVLASLKVENVG
PDPVSQVLLSFPNIQAKNLAAIRAFGTEGKVKGPSTVLPIEVVQPSGAPPELTFFSALLP
KPLEKGKILHLDVLTVFTHSLQPFPEEITQAEAQLVVYQDSAHYLSPYPVKVQTLAIRLP
GGRVESYTRHPSAKLVDSELKYGSSEELPPFSYLPVIVHFENNNPFAVAKEVIREIEISH
WGNVQITEYYNIAHGGARLKGEFSRIDYQSRPYVRGVSSFRNLIARLPPRAHSIYYRDEI
GNISTSHLWSDSKKTHLEIEPRFPLFGGWQTTFTVGYGLPLEDFVFYSDGKRFLNITFGS
PIEEILIEKLIVKVVLPEGSKDIEVSAPFPTNQSQEVKYSHLDIVGRPVVVLEKPDVIPE
HNLYFQVYYKFNNISLLREPLMLITGFFLLFVACIVYMRTDMSISKSSPSYLAKLQWDEV
QATVQKIQGIFEQCLAVHDKLEASLRDLSRTGDIQSCKAARKAADAQFKELSKELKPLLT
SLQSSPQSYQIWPKVEDLIRKEREMQEKLMTRHSTVVDSFEKKLRGQDVENRIALQQQKI
AALRQEVESLLEYISEI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgccgctgcctctccgccgcgccaccccactcctcctcctcgccgtcctc
gtcggcgccctcgcctccaccacccgcgccgatctcgtcatcaccagggcagatcggagg
gttgatctgacttcgcatatcgttcgcgtcctcgcttccctcaaggttgaaaatgttgga
ccagacccagtctctcaagttttactatcttttcccaacatccaagcaaagaacttagca
gctataagagcatttggcactgaaggaaaagtgaagggtccaagtactgttctgccaatt
gaagttgttcagccttctggagctcccccagagctaactttcttttcagcattgttaccc
aaacctttggaaaagggaaagattctacacttggatgtcctgactgtattcacacactct
cttcaaccattcccagaagaaatcacgcaagctgaagcacaacttgttgtctatcaggat
agtgctcattatctgtcaccttaccctgttaaggtacagacacttgctatcagattgccc
ggcggaagggttgaatcatacacaaggcatccaagtgcaaaacttgtggattcagaactg
aaatatggatcatctgaagagcttcccccgttttcctacttacctgtgatcgtgcacttt
gagaacaacaatccttttgcagtcgcgaaggaagttataagggagattgagatatctcac
tggggaaatgtacagattacggaatactacaacattgcccacggtggtgccagactcaag
ggtgaattttccaggattgattatcagtccagaccttacgtaagaggtgtttcatctttt
aggaatcttattgcgagactgcctccaagggcccactctatttattacagagatgagatc
ggtaatatttcgacatcacatttgtggagtgattccaagaagacccacctggaaattgaa
ccaaggtttccattgtttggtgggtggcaaacaaccttcactgttggttatggtttacca
cttgaagactttgttttctattctgatggaaagaggtttcttaacatcacttttggttct
ccaattgaggaaattctcattgaaaagcttatagtaaaggttgtactacctgaagggtca
aaggatatcgaagtttcagctccctttccaacaaatcagtcgcaagaggtgaagtattca
caccttgacattgttggaaggccagttgttgtcttggagaagcctgatgttattccagag
cataatttgtatttccaggtttactacaaattcaacaatatatccttgctccgagagccg
ttgatgcttattactggtttcttcctcctgtttgtggcctgtattgtttacatgcgcact
gatatgtcaatttccaagagttctccttcttacttggccaagctgcaatgggatgaggtg
caagccactgttcagaaaatccagggtatctttgagcaatgcttagcagttcatgataaa
ctggaggcctcattgcgtgatttatctaggactggggacattcagtcttgcaaggctgct
cgtaaagctgctgatgcacagtttaaggagctatccaaagagctgaagccattgttgaca
tctctacagtcatctccccagtcttatcagatatggccaaaggtagaggatttgatcaga
aaggagagagagatgcaggagaagcttatgacaaggcattccactgttgtcgacagcttt
gagaagaagctgcgtgggcaagatgtagagaacaggattgctttgcagcagcagaaaatt
gcggccctgaggcaggaggtcgaatctcttttagagtacatcagtgagatttga
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