Panicum virgatum (switchgrass): 120647560
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Entry
120647560 CDS
T07260
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120647560
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120647560
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120647560
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EhaL
Motif
Other DBs
NCBI-GeneID:
120647560
NCBI-ProteinID:
XP_039780322
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All DBs
Position
9K:complement(70172666..70175740)
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AA seq
337 aa
AA seq
DB search
MDPSNHDTARQSPMATRGDVEKGGVKKEAGKVPSPLYPQHEGEREWVPWIVPVFFVANIT
VFVVTMYVNNCPAHTTARDGKCIGRFLGRFAFQPLRQNPLLGPSSATLTKLGALVWQKVV
HEHQGWRLLSSMWLHAGVVHLVANMMSLLFIGMRLEQQFGYVRIGAVYHLSGLGGSVLSS
LFIRNHISVGASGALFGLLGAMLSELLTNWTIYTNKVAAVLTLLFVVAVNLVLGILPHVN
NFAHIGGFLTGFLLGFVVLMRPHFGWMERYGMPAGSACTSRKYLLYQWILMAIALLLLVI
GFAVGMAMLFRGSNASDSCSWCHYLSCVPTARWTCTN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccaatcacgacacagcacggcagtctccaatggcgacgcgcggggacgtg
gagaagggcggcgtgaagaaggaggccggcaaggtgccgtcgccgctgtacccgcagcac
gagggggagcgggagtgggtgccgtggatcgtgcccgtcttcttcgtcgccaacatcacc
gtcttcgtcgtcaccatgtacgtcaacaactgccccgcccacaccaccgccagagacggc
aagtgcatcggacgcttcctcggccgcttcgccttccagccgctgcgccagaacccgctc
ctcggaccatcctccgccacgctcaccaagcttggggcccttgtgtggcagaaggtggtg
cacgagcaccagggctggcgcctcctttccagcatgtggctgcacgccggtgtcgtgcac
ctggtggccaacatgatgagcctcctcttcatcggcatgcgcctcgagcagcagttcgga
tacgtgaggattggtgctgtctaccacctctccggcctcggcggcagcgtcctgtcctcc
ctgttcatccgcaaccacatctccgtgggcgcgtccggcgccctgttcgggctcctgggc
gccatgctctcggagctcctgaccaactggaccatctacaccaacaaggtggccgccgtg
ctgacgctgctgttcgtggtggccgtgaacctggtgctgggcatcctcccgcacgtcaac
aacttcgcccacatcggcggcttcctcacgggcttcctgctggggttcgtggtgctcatg
cgcccgcactttgggtggatggagcgctacggcatgcccgccggcagcgcctgcacctcc
aggaagtacctgctctaccagtggatcctcatggccatcgccctcctcctcctcgtcatc
ggattcgctgtgggcatggcgatgctcttccgcggctccaacgccagcgacagctgctcc
tggtgccactacctcagctgcgtgcccaccgccagatggacatgcaccaactga
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