Panicum virgatum (switchgrass): 120647570
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Entry
120647570 CDS
T07260
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120647570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120647570
Spliceosome [BR:
pvir03041
]
Common components
Common spliceosomal components
SR proteins
120647570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_5
RRM_3
DUF2129
Motif
Other DBs
NCBI-GeneID:
120647570
NCBI-ProteinID:
XP_039780335
LinkDB
All DBs
Position
9K:70239550..70266541
Genome browser
AA seq
256 aa
AA seq
DB search
MRPVFCGNFDYDTRQYDLEGLFSKYGPIRRIDMKSGYAFIYFEDERDAEDAIRRLDNVSF
GYSRRRLSVEWSRQVEPVSRSRDRPAGDVKPTRTLFVINFDPIRTKIQDIERHFEPYGKI
TNIRVRRNFAFVQYETQEEASAAVKNTDKSTILDRVVTVEYAFRDDDNERDDRYGGSPKR
RGHDRHHGSPYTRSPSPRYRRDYSPNYDRRGRYPGYDRRDGAMYDRRSPVYDRYDRGRSP
AYDRYDRRRSPGYDQY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtcttctgcggcaacttcgactacgacacgcgccagtacgacctggagggt
ctcttctccaagtacggccccatccgccgcatcgacatgaagtcaggttatgctttcatt
tactttgaagatgagcgcgatgcagaggatgctataaggcgtctcgacaatgtgtctttt
ggttatagcaggcgcaggctctctgtagaatggtcgaggcaagttgaaccagtgtcaagg
agccgtgataggcctgctggggatgtaaagccaactagaactctctttgttatcaatttt
gaccccatacgcactaaaattcaagatattgagaggcattttgaaccatatggcaagatt
acaaacattcgtgttcgaaggaactttgcgtttgtacagtacgagacacaagaggaagct
agtgctgctgtcaagaacactgataagagcacaatattggacagggtggtgacagtagaa
tacgccttccgggatgatgacaatgaaagagatgacagatatggtggcagccccaagcgg
cgtggtcacgacaggcatcacggtagcccctacacgcgctcacctagcccaaggtaccga
agggactacagtccaaattatgatcggcgcgggcgttatcctgggtatgatcgccgtgat
ggagcaatgtatgataggagaagcccagtatatgatcgttacgacaggggcagaagccct
gcttatgatcgctatgataggaggagaagtcctggttatgatcaatactag
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integrated database retrieval system
