Panicum virgatum (switchgrass): 120647627
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Entry
120647627 CDS
T07260
Name
(RefSeq) branched-chain-amino-acid aminotransferase 5, chloroplastic-like isoform X1
KO
K00826
branched-chain amino acid aminotransferase [EC:
2.6.1.42
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir00280
Valine, leucine and isoleucine degradation
pvir00290
Valine, leucine and isoleucine biosynthesis
pvir00770
Pantothenate and CoA biosynthesis
pvir00966
Glucosinolate biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
pvir01240
Biosynthesis of cofactors
Module
pvir_M00019
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
pvir_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pvir_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120647627
00280 Valine, leucine and isoleucine degradation
120647627
00290 Valine, leucine and isoleucine biosynthesis
120647627
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
120647627
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
120647627
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120647627
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.42 branched-chain-amino-acid transaminase
120647627
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class IV
120647627
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GFIT
Motif
Pfam:
Aminotran_4
DUF2436
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
120647627
NCBI-ProteinID:
XP_039780417
LinkDB
All DBs
Position
9K:70738433..70742597
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AA seq
404 aa
AA seq
DB search
MELGLASLGALPPAPALAGWLTRHSLSPWLKIQNHIYSMPSLSYKVPSVTECHASLSTNY
IRETSEVVDLDWENLGFGLVETDFMYVAKCGPDGNFSKGEILPFGPIAVSPSAGVLNYGQ
GLFEGLKAYRKTDGSIMLFRPEENATRMITGAERMCMPAPTVEQFVDAVKQTVLANKRWV
PPTGKGSLYIRPLLMGSGAVLGLAPAPEYTFIIFVSPVGNYFKEGLSPINLIVEDKFHRA
SPGGTGGVKTIGNYASVLKAQKIAKGKGYSDVLYLDAVHDKYLEEVSSCNIFVVKDNVIS
TPAIKGTILPGITRKSIIEVAQSKGFKVEERLVSVDELVNADEVFCTGTAVVVSPVGSIT
YLGKRVEYGNQGVGVISQQLYKSLTSLQMGLVEDCMGWTVQLNQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagctcggcctcgcctccctcggcgccctcccgcccgctccggcgctcgcaggatgg
ctcacgcggcactcgctctcgccgtggcttaagatccagaaccacatttattcaatgcca
agtctctcttacaaggttcctagtgtgacagaatgccatgcttctttatcaactaactac
atcagggaaacatctgaggtggttgatttggactgggaaaaccttggctttggccttgtc
gagactgattttatgtacgttgcaaaatgtgggcctgatggaaacttttccaaaggtgaa
atcctaccatttggacctatagcagtgagcccatctgctggagtcttaaattatggacag
ggattgtttgaaggcctaaaagcatataggaaaactgatgggtccatcatgttatttcgt
ccggaagagaatgccacaaggatgataactggtgcagagcggatgtgcatgcctgctcca
actgttgagcaattcgttgatgctgtaaaacaaactgttttggcaaataaaagatgggtg
cctcctactggtaaaggttctttgtatattaggccactacttatgggaagcggggctgtt
cttggtcttgcacctgctcctgagtacacctttataatttttgtgtcccctgttggcaat
tatttcaaggaaggtctgtctccaattaatttgattgttgaagacaaatttcaccgtgcc
agccctggtggaactggaggcgtgaaaaccatcggaaactatgcctcagtattgaaagct
caaaagattgctaagggaaaaggatattctgatgtcctttatttggacgctgttcatgac
aaatatcttgaagaagtctcttcctgcaatatttttgttgtgaaagacaatgttatttct
actcctgcaattaaaggaacaatattgcctggaataacaaggaaaagtataattgaagtt
gctcagagcaaaggcttcaaggttgaggagcgcctagtgtcagtagatgagttggttaac
gctgatgaagttttctgcacgggaactgctgttgtcgtgtcacctgtggggagcattaca
tatctggggaaaagggtagaatatggcaaccaaggagtcggtgtcatatctcagcagcta
tacaagtcacttacaagcctccagatgggtcttgtggaggattgtatgggttggactgtg
caactgaatcagtag
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