KEGG   Panicum virgatum (switchgrass): 120647634
Entry
120647634         CDS       T07260                                 
Name
(RefSeq) signal recognition particle receptor subunit alpha-like isoform X1
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120647634
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120647634
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   120647634
SSDB
Motif
Pfam: SRP-alpha_N SRP54 SRP54_N AAA_22 AAA_17 AAA_16 MeaB MMR_HSR1 AAA_30 CLP1_P AAA_33 DUF190
Other DBs
NCBI-GeneID: 120647634
NCBI-ProteinID: XP_039780429
LinkDB
Position
9K:70778673..70787146
AA seq 657 aa
MARGWVCWAELSFVYVRSGFWKGRLWDEVLRGTSISGAARVDCNRRFAAMLEELLIFTRG
GLILWSSCRALGAAALKGSPIDALIRSCLLEERSADASFSQDNYALKWTFHNDLGLVFVA
VYQKILHLLYVDDLLAAVRKDFSQIYDPKRTNYDDFTDIFRQLHLEAQARAEDMKSKQAI
SSRTLPAVSHKTAPKARGAAARATSKGKDDSDGDSEHHALANGTFTGHQSAAPNDSSLVK
GKENGVPKDNGAFNVTKLQRLRKNDRKNTGADNATKKLTKPDTKKKGKQDRVWDDKPSNK
KLDFTDPADERGDEVTEHVALNQGESMMDKDDNLSSDSEEEEVEDGPKKKGWFSSMFQSI
AGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQT
AMEEALLRILTPRRSIDILRDVHAAKERGRPYVIVFVGVNGVGKSTNLAKVAYWLLQHNL
TVTLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAREAIQEASRNKSDVVLVD
TAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTAR
LIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggccagagggtgggtatgttgggctgaattgagctttgtgtatgtacgatctggattc
tggaagggtcgattatgggacgaggttttgagaggcacatcgatctctggagcagcaagg
gtcgattgcaacagaaggttcgccgccatgttggaggagctgctcatcttcacgcggggc
ggcctcatcctctggtcctcgtgccgggcgctcggcgccgccgccctcaagggctcgccc
atcgacgccctcatccgatcctgcctcctcgaggagcgctccgccgacgccagcttctcc
caggacaactacgccctcaagtggaccttccacaacgacctcggcctcgtctttgtcgcc
gtctaccagaagattctgcatcttctctacgtcgatgatctcctcgccgccgtccgcaag
gacttctcccagatttatgatcccaagcgcaccaactacgacgacttcaccgacatattc
cgccagctccatctcgaggcccaggcgcgtgccgaggacatgaagtccaagcaggccatt
tcgtcccgtacgctgccagccgtctcccacaagactgctcccaaggctcgcggcgctgct
gcccgtgctaccagcaagggcaaggatgactctgatggggactcggagcaccacgctttg
gcaaatggtaccttcacgggccaccagagtgctgcacccaacgacagctctcttgttaag
ggcaaggagaacggggtccccaaagacaacggggccttcaatgtaactaaactacagagg
ttgcgaaagaatgataggaagaacaccggtgcggacaacgcaaccaagaagctgaccaaa
cctgacacaaagaagaaagggaagcaagacagggtgtgggatgacaaaccttccaacaag
aagttggatttcacagacccggctgatgagagaggggacgaggtgacagaacatgtcgca
ctcaaccagggagagagcatgatggataaggatgacaacctcagcagcgacagcgaggag
gaagaggtcgaagatggaccaaagaagaaaggctggttctcctcaatgtttcagagtatt
gctggtaacaatgtattggagaagtctgatctacaacctgcgctcaaggctctcaaagat
agactgatgacaaagaacgtggcagaggaaattgcggagaagctttgtgaatctgttgca
gctagccttgagggcaagaagctaggatcattcacaagaatatcatctacagtccagaca
gctatggaggaggctcttcttcgcattttgaccccaaggcggtctattgacatactgagg
gatgtacacgcagccaaggagcgtgggaggccgtatgtcattgtttttgttggggtgaat
ggagttggcaaatcgaccaatcttgcgaaggttgcttattggcttcttcagcataacctc
actgtaacgcttgcagcatgtgacaccttcagatctggtgctgttgagcagctgcggact
catgcacgcaggcttcagatacctatttttgagaagggttatgaaaaagatccagcagtt
gtagcgagggaagctattcaggaagcaagccgaaacaaatcagacgttgttcttgttgac
actgctggacgtatgcaggataatgagccactcatgagagcgctctccaagctcatcaat
cttaacagtccagatttagttttatttgttggagaagcattggttgggaatgacgctgtc
gatcagctcactaagttcaaccagaaattagcagacctgtctgctgttcctactgctaga
ttaattgatggtatcctgctcaccaagtttgacaccattgacgacaaggttggagcagcg
ctttccatggtgtatatatctggagctccggtcatgttcgtcggttgtggccagtcctac
acggacctgaagaagctgaatgtgaaatccatcgttaagaccctcctgaagtga

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