Panicum virgatum (switchgrass): 120647654
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Entry
120647654 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120647654
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120647654
03036 Chromosome and associated proteins [BR:
pvir03036
]
120647654
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
120647654
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120647654
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120647654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Cnd1
Motif
Other DBs
NCBI-GeneID:
120647654
NCBI-ProteinID:
XP_039780462
LinkDB
All DBs
Position
9K:complement(70936886..70962468)
Genome browser
AA seq
1806 aa
AA seq
DB search
MASPPERAVAALERCFRALPADAVPAVVDCVLASSASTSPAQLFHALLRSPTCPEQEQEQ
GLQAQSDLHASISYAAALRHLLSRFDNPPKAKDALRLLLWRLFLPLLRDTIEPNLHQAVA
LMCDAISDTGSWDLLGATIVPFCIRSSAVAMGLSACHDSMLYHGMMEADLAGENLAPMLT
LSKASSVLALLLADILVRRRTVLSVDHLDSQEGAIDLDKLVQNLTWDLSTLVLKMFAHGQ
EYRSCATQILLQPLLISLADNPCVTVMLGAVQHRLSRFGFLECIWDSCISLFSLGCGERL
DAYNILSLYFSTLKLGHQVPVLGADKLQEFDLRNVLEFWNQLRKGLVDKDSFVRKQAFYV
LTISLSIFTSFGNDGSQHCSSKSSADLPAQTKSNTATTKRERWANKEAKSLGVREMDQSD
EHCSNGLDRWKIFLLLYEMLQEYGTHLVEAAWTHQVMLLFESTPQTDYLNHTSRGTFHAQ
MESWEGILQWMTVLWERGFTHDNPQVRCLVMQSFLDIAWERYKVCSHIIPRGFVLGSLIR
GLNDVVHHKDFGIGGVYNSKTIKGAKSFFSTYAQNLTRRDRMHLVWSLASAAKHDSFGRA
GLMTLASCVASCTCQSDINDAPCATPGKGASKCDGDVPPEVRSADLLDALWILSERSKQH
FNPKYRLKVCEQVIKVATSLINATEVPLNQLLHFISTIPREFTDYFGPLRVIVQEWFVQK
KECSPGYTLLSKLIDFPTTFMKHNKQDQGSNLFDDEDVNAWEAEARRWARTLFLVTSDEQ
HLKRILGFIEAHGYKLSESEQCPVGECVPIKFFIIVLSFIEELEVGQRKLVCQDKTILKG
GSDRANGLELHDLNEKLAKSLSLVLETMVVFSKLSCSVFWLRNIENMDLPYTVKGKLGGP
SQRRLATSITSSVLQGIWSMRFISSVASWCNHYNSGDSFFSTFSFLWDFYWKVIKHSTYA
TETGAELHLAAYEALAYVLAALSAARNSKYLDLVETKQTNQARKFSLDISVTTFLNNINH
LLANGILTRSRRAVLMTWKWLCVDSLLSISCCLSDNESQLKRLDPLFSDSTLQYIFHDVI
ESLENAGENSVLSILRCVRSVLGLLHLNMGNRSFTSVGISYETMMQLAKSSWILHLSCNK
RRVAPIAALLSAILHPAMFCNLEMHQANEKGPGPLKWFIENLLNEGSKSPRTIRLAALHL
SGLWLMYPKTLRFYMEELKLLSLYGSVAFDEDFEAELSENHEARFEVSMLAQSPDREFTE
VFINTELYARVSVAVLFHQLWKQIKEKKISETEEALQSGKLFLLKLLDSAVNDKDLSKEL
YKKYSSVHRRKVRVWQMICVLSQYVEDDIVREVISSTHTCLYRNNLPAVRQYLETFAILL
YLKFPTMAEEQLIPIFHDKGMRQQALSSYVFIAANIILHSRQLSVQINHLNQLLPPILPF
LTSHHHSLRGFTQLLVHSVLSRLWPTLRLETSEDVIFERRCFQELKDYLAENSDCVRLRV
SIEGFLDVFDPNASGTPSGIFSARPEVSEFECVPVSVMERVIDFLNDVREDLRHAIAKDT
VTIKNEGLTVEEHGNEGKSGECVSELSQPGCQDALDFQKKITPRRDSEQASSLNARGPSR
LISEIEEDDQFFNLALEARLHAVETIKQSQQELIVVASLVDRIPNLAGLTRTCEVFRAAG
LVVADKSILQDKQFRLISVTAEKWLPISEVPVDSVKAYLERKRAQGYSVIGLEQTAHSRP
LDRFEFPRRTVLVLGREKEGIPVDIIHVLDGCVEIPQLGVVRSLNVHVSGAIAVWEYTRQ
HNQRGT
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctcccgagcgtgcggtcgccgccctcgagcgctgcttccgcgccctcccc
gccgacgccgtccccgccgtagtcgactgcgtcctcgcctcctccgcctcgacctcccct
gcccaactcttccacgccctcctccgttccccgacttgccccgagcaggagcaggagcag
ggtctccaagcccagtccgaccttcatgcctccatctcctacgccgctgcgctccgccat
ttgctctcacgattcgacaaccctccaaaggctaaagatgctctgcgcttgctgttgtgg
aggttattcctgccactgctcagggataccatcgaacccaacctgcaccaggcggttgcc
ttgatgtgcgatgcaatctccgacactggatcctgggacctgctaggagctaccatagta
ccattctgcatacggtcatctgctgttgccatgggcttgtccgcctgccatgactccatg
ctttaccacggtatgatggaagcagatctcgctggggaaaatctggccccaatgctaacg
ctctccaaggcgagcagtgtgttagcattgttgctggcggacatattggtgagacgaagg
actgtcctcagcgtggaccaccttgattctcaggaaggtgctattgatttagataaattg
gtgcagaatttgacatgggacctctccacattggtactcaagatgtttgcacatggtcaa
gagtatcgatcttgtgccactcagatccttcttcagcctctgctcatctcacttgctgat
aatccctgtgtcactgtaatgcttggtgcagtccagcataggctatctaggtttggtttt
ctggaatgtatatgggattcctgtatttctctattttcattggggtgcggcgagcggttg
gatgcgtacaacatactatctttgtacttctcaacactcaaattgggtcatcaagtcccc
gtcttgggagctgacaagctccaggaattcgaccttaggaatgtccttgagttttggaac
caactgcgcaagggactggttgacaaggattcttttgtaaggaaacaggccttctacgtc
ttgaccatatcactgagcatctttacctcttttggaaacgatggaagccaacattgctcc
agcaagagctcagctgatttgcctgctcaaaccaaatcaaatactgcgacaacaaaaaga
gaaaggtgggccaacaaagaagccaagtccctaggtgttagagagatggaccaatcagat
gaacactgttcaaatggtctagatcggtggaagatcttcttgttactctatgagatgctc
caagagtatgggacacatttagttgaagcagcctggacacaccaggtgatgctgctgttt
gaatctacaccacagactgactatttaaatcacacctcccgtggaacctttcatgctcag
atggaatcttgggagggaattttgcagtggatgacagttttgtgggagcgtgggttcact
cacgataatcctcaagtgagatgcctagttatgcaatcctttttggatattgcatgggaa
cgctacaaggtttgcagtcacataattccaaggggttttgtgcttggttctctgatacgt
ggtttgaatgatgtagttcaccacaaggatttcggcatcggtggtgtctataattcaaaa
accataaaaggtgcaaaaagctttttcagcacttatgcccagaacttgacaagacgtgat
cgtatgcatcttgtttggagcctggcatctgctgctaagcatgattcatttggacgagca
gggttaatgactcttgcatcatgtgttgcttcatgcacatgtcagtcagatataaatgat
gcgccatgtgctacccctgggaaaggagcatcaaaatgtgatggggatgtacctcccgaa
gttaggtctgcagatttattagatgccttgtggattcttagtgagaggagtaaacagcac
ttcaatccaaagtatcgtctgaaagtttgtgagcaggttatcaaagttgcaacatcgctg
ataaatgccactgaagttcctcttaaccaacttctgcatttcatttctacaatacctcga
gagttcactgattattttggaccattgagagtgatagttcaggaatggtttgttcagaag
aaagaatgttctcctggttacactttgttgagtaagcttattgatttccctaccacattc
atgaagcacaacaaacaggatcaaggttcaaatttgtttgatgatgaggacgtgaatgca
tgggaagctgaggcaaggaggtgggccagaactctttttcttgtaacctcagacgagcaa
catttgaagcgaattcttgggtttatagaggcacatggctacaagctctcggagtcagag
caatgccctgttggagaatgcgttcccataaagttttttatcatcgttttaagcttcatt
gaggaacttgaggtggggcagagaaaacttgtttgccaggataaaaccatcttgaaagga
ggttcagatagagcaaatggattagaactccatgatctcaacgaaaagcttgcaaaatca
ttgtctctagttttggaaaccatggtggtcttcagcaagctatcttgctcagttttctgg
ttgaggaatatagagaacatggatttgccgtatactgttaaaggaaagcttggaggccca
agtcagcgtcgtttggctacctctataacctcttcagtattgcagggtatttggtcaatg
aggtttattagttctgttgcctcatggtgtaaccactacaactctggtgattcttttttc
tccacattttcctttctctgggacttctattggaaagttatcaaacactccacttatgcc
acggagactggagctgaacttcacttggcggcttatgaagctctagcctatgttctagca
gctctatccgcagctcgcaattctaaatatctggatttggtggaaacaaagcagacaaat
caagccagaaaattctcattggatatttctgtgaccactttccttaacaacatcaaccat
ctccttgctaatggaattttgacacgtagcagacgtgctgttctaatgacttggaagtgg
ctttgtgtagactccctgctatccatttcatgctgccttagtgacaatgaatcccagctg
aagaggttggatcctttattttcagattcaaccctccaatacatctttcatgatgttatc
gaaagccttgagaatgctggtgagaattctgtcttatccatcctgagatgtgtgagatct
gttttgggactgttacacttgaacatgggcaatagaagttttacctctgtaggcatcagt
tatgagacaatgatgcaattagcaaagtcctcctggatcttgcaccttagctgcaacaaa
cgacgagtggcaccaattgctgcactgctatctgcaatattgcacccagcgatgttttgt
aatttggaaatgcaccaggcaaatgaaaaagggccaggccctttaaaatggtttattgag
aatcttcttaatgaaggttcaaaaagtcctcgaactattcgcctagcagctttgcatttg
agtggtctttggttgatgtacccaaaaactcttagattttatatggaggaactgaagcta
ctttcattatatggatctgtggcatttgacgaagattttgaagctgaactctctgaaaac
catgaagcaagatttgaggtttccatgctagcacaaagtcccgatcgtgaattcacagag
gtcttcattaatacagaattatatgctcgtgtttcagttgctgttctctttcatcaactt
tggaagcaaatcaaagaaaagaaaatatcagaaactgaagaagctcttcaatctggcaaa
ctatttcttctaaaacttctggactcagcggtgaacgacaaggatctttcaaaagaactg
tacaagaaatatagcagtgtacacaggcgtaaagttcgtgtgtggcagatgatatgtgtt
ttatcgcaatacgtagaagacgatatagttagagaagtgatatcgagcactcacacctgt
ctttatagaaataatctgcccgctgtccggcagtacttggagacatttgctatactctta
tacttaaaatttcctacaatggcagaggaacaacttattcctatttttcatgacaaaggg
atgcgacaacaggcactatcttcttatgtttttatagcagcaaacattattcttcattca
aggcagctgtccgtccagataaaccacctaaatcaactgcttcctccaatactgccattc
ttaacatcccatcaccacagtttacgtggttttactcagctacttgtccattcagtgcta
tcaaggttgtggcctactctacgtctggaaacttcagaagatgtaatctttgagaggagg
tgctttcaagaattgaaagattatctggcagaaaattctgactgcgtgaggctcagagtt
tcaatcgaaggtttccttgatgtttttgatcccaatgcatctgggactccttccgggata
tttagcgctcgccctgaggtgtccgagtttgagtgtgttcctgtgtcagtgatggaacgt
gtgattgacttcctgaacgatgtgagggaggacttgagacatgctatagcaaaagacaca
gtaacaatcaagaatgagggtctcacagtggaagagcacggcaatgagggcaaaagtggc
gagtgtgtgtctgaattgtcacaacctggctgtcaagatgcattggacttccagaagaaa
ataacgccccgcagggactctgagcaagcatcgagcttgaacgccaggggtccctcaaga
ttaatttctgagattgaggaagatgaccagtttttcaacctagcactagaagcaagatta
catgctgtggaaacgatcaagcaaagccagcaagaactgattgtagtggcatcattggta
gaccgtatacctaatcttgcgggtctgacaaggacgtgcgaggtcttcagagcagctggc
ttggttgttgccgacaagagcattcttcaggacaagcagttccgactgatcagtgtaacc
gctgagaaatggctgcccatctcggaggtcccggtggacagcgtgaaggcctacctggag
aggaagcgggcgcaggggtactcggtgatcgggctggagcagacggcccacagcaggccc
ctggacaggttcgagttcccgaggcggacggtgctggtgctgggccgggagaaggaaggc
atccccgtggacatcatccacgtcctggacgggtgcgtggagatcccgcagctgggcgtg
gtgaggtccctcaacgtccatgtcagtggcgccatcgctgtctgggagtacacgcgccaa
cacaatcagcgtggcacttga
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integrated database retrieval system
