Panicum virgatum (switchgrass): 120647906
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Entry
120647906 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP5-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120647906
04141 Protein processing in endoplasmic reticulum
120647906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120647906
04131 Membrane trafficking [BR:
pvir04131
]
120647906
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120647906
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120647906
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120647906
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120647906
Autophagy
ER-phagy
ER stress-related proteins
120647906
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120647906
Exosomal proteins of other body fluids (saliva and urine)
120647906
Exosomal proteins of colorectal cancer cells
120647906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FkbO_Hyg5-like_N
DUF3828
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
120647906
NCBI-ProteinID:
XP_039780647
LinkDB
All DBs
Position
9K:complement(27667625..27669073)
Genome browser
AA seq
440 aa
AA seq
DB search
MARQDLVRAVIWLLVFALAALGKAGALFDQEWPPDPAMYPPGRVIAIDLGNTNSCVAGYD
GPGETQTMFQLCIPSWIAVADDGAILVGDDARKHAVVNPQAAISGFKRLLGQRLTRVFER
EFAERVKENLPYKVEEENVEPHIQVTTTDGAVRHLGVGKLTATVVAKLKETAEAHLGHRV
EAAILTLPLELCNHASRYAAFFAGRVAGFEAMAVINEPTAAANAYGVDENLREEGVVVVL
HVGGGTAEASALTLVDNVYEILAVDYDPFFGGQEFDRRIVDQFIGLVRNKHGKDISKDGA
ALDKLRTACERAKKTLSHQDHAQVIIESLVDGVDLAEPLTRDKFEELNHDLFLKVVELVD
KVVTQAEVSMGSKLDVDEVVLIGGSTMIPKVRELIRDYFGGTKELNTRIKPDEVVTIGAA
QYSKWIYDKRRSDLHIRGLS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccaagatctcgttagggctgtcatatggctcctggtcttcgcacttgcagcg
ctcggcaaggcaggcgcgctattcgaccaggagtggcctcccgatccggcgatgtacccg
ccggggagagtcatcgccatcgacctgggcaacaccaactcctgcgtcgccggctatgat
gggcccggcgaaacccagaccatgttccagctctgcatcccatcctggatcgccgttgcc
gacgacggcgccatcctcgtcggcgacgacgccaggaagcacgccgtcgtcaatccccaa
gccgccatctccgggttcaagcgcctccttggccaaagattgacacgcgttttcgagcgg
gagttcgctgagagagtcaaggagaatctaccgtacaaggttgaggaggagaacgtcgaa
ccccacatccaggtgacgaccaccgacggcgccgtccggcacttgggcgtcgggaagctc
acggccacggtggtcgccaagctcaaggagacggcggaggcgcacctcggccaccgggtc
gaggctgccatcctcactctcccgctggagttgtgcaaccacgcgtccaggtacgcggcg
ttctttgccggcagggtcgccggcttcgaggccatggcggtgatcaacgagcccaccgcg
gccgccaacgcctacggcgtcgacgagaacctgcgcgaggagggcgtcgtcgtcgtcctg
cacgtcggtggcggcacggccgaggccagcgccttgacgctcgtggacaacgtgtatgag
atcctagcagtggattacgatcctttcttcggaggacaggagttcgatcggaggatcgtg
gaccaattcatcgggctggtcaggaacaagcatgggaaggacatcagcaaagacggtgct
gctctcgacaagctgaggacggcatgcgagcgtgccaagaagacactgagccaccaggat
catgcccaggtcatcatcgaatcgctcgtcgacggcgtggatctggcagagccgctgacc
cgggacaagtttgaggagctgaaccatgatctgttcctcaaagtcgtggagctggtagac
aaggtggtgacacaagctgaggtgtccatgggcagtaagctggacgtcgatgaggttgtt
cttattggtgggagcaccatgatcccaaaggttagggaactcatcagggactattttggc
gggaccaaggagctcaatacaaggatcaaacctgatgaagtggtcaccattggagccgcg
caatacagcaagtggatttacgacaaacgacgatcagacttgcatattcgggggctgagt
tga
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