KEGG   Panicum virgatum (switchgrass): 120647935
Entry
120647935         CDS       T07260                                 
Name
(RefSeq) flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03410  Base excision repair
pvir03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120647935
   03410 Base excision repair
    120647935
   03450 Non-homologous end-joining
    120647935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120647935
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120647935
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120647935
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    120647935
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     120647935
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     120647935
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120647935
SSDB
Motif
Pfam: XPG_I
Other DBs
NCBI-GeneID: 120647935
NCBI-ProteinID: XP_039780671
LinkDB
Position
9K:complement(29843834..29847842)
AA seq 216 aa
MKAEHLVRTLPGRGELGGTREARSRRHQRRQTSAQASRSRLLAPGPEPMQPSTSSRSSFR
SARLTAPPSEHKGQSVRMSICLLLKNLIGLVAVPQCKGQWIRLVYRRLQSSTIFLCPSAI
RSTDKGDADTAAKINSLEKKTISPTRQELEACKTLLRFLGVPVVQAASEGEAQCIGLCKE
AKAKAVASEDFDCLPLGAPLLLRDFNLNKTKLVKKF
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaaggcggagcacctcgtccgcacgctccccggacgcggcgagcttggtggaacgcgg
gaggcgcgctcgaggcggcaccagcggcggcagacgagcgcgcaggcgtcgaggtcgcgc
ttgctggcgccgggccctgagccgatgcagccgagcacgtcttcaaggagctcgttcagg
agcgcgaggttgacggcgccgccttcagagcacaaggggcagagtgtaagaatgtccata
tgtttgttactgaagaatcttattggtttggttgctgtgccccaatgtaagggtcagtgg
ataagacttgtgtaccgccggcttcaatcaagcacaatattcctgtgtccttcggcgatc
aggtctacggataaaggggatgctgatactgctgcaaagataaactcgcttgagaagaag
acgatcagccctacaagacaagagcttgaagcttgtaaaacactccttagatttctaggg
gttccggtggtacaggcagctagtgaaggggaggcccaatgcatcgggctgtgcaaggag
gctaaggcaaaagctgttgcttcagaagactttgattgtcttcctctcggggctccactc
ttgcttcgggattttaatctcaacaaaactaaacttgtcaagaagttttag

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