Panicum virgatum (switchgrass): 120648016
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Entry
120648016 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120648016
KO
K14638
solute carrier family 15 (peptide/histidine transporter), member 3/4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120648016
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC15: Proton oligopeptide cotransporter
120648016
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
DUF6320
Motif
Other DBs
NCBI-GeneID:
120648016
NCBI-ProteinID:
XP_039780733
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All DBs
Position
9K:complement(43155843..43163825)
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AA seq
1207 aa
AA seq
DB search
MDAERGDAQSPLLLQPQPPNQTQVSPANQHYNKPFSWKAPAIVLAFEFLESIAYSGIALN
LVVYLGTVLHGTTASSAANVDAWNGATFLTPVLGAFLADTYWGKYKTVAISIIFYVGGLL
VITASAVIPSLRPASCEGGSCPPATGFQYFVLFASLYLISIGTGGVKSALLPFGADQYDD
SNLEESKNKQLFFSWFFIAVNLGVFISGTVLVWIQQNVAWSLGFGISLICLLIATVAFFI
GTPAYRVQLPTGSPLKSIVMVFVASFKKRRVAVPADSTLLFEGDDAESSNMVPNKLEHTN
EFRCLDKAAVVLEDQEIKGSRRPWMLCTVTQVEEVKILIRMLPIWFTCVFYSAAMCQTAT
TFVQQGNAMNTKIGSFSVPAASLNSAEVIFMMVWVVFQDSVVIPVARRYTGNPTGLTLLQ
RMGVGRLLAVPAMAAAALVETWRLRRVRAGGNLSIGWQLPQFVILACSDVFCGIAQLEFF
YAEAPTSMRSLCSAFQFLAMSLAYYVNTLVVSVVAAATTAGGRPGWLPVHLNDGHLDYYF
WLWTGISAVNYAVYTAFARRYTLKKVVRQYVWFSQEYLNGEEKSRGGRPSPPPASQPASR
GRSGKGTRVRSLSPTVFHRSGMAPTPGGGSNGHHHQRRQQVSSMESGGDAPAAARRSFNW
KAPAIVLVFELLESIAFSGVALNLVVYLATVLHGSTAFNAAHVDTWNGTTFIVPVIGAFL
ADSYWGKYRTILAAIAFYLVGLVLLTVSAAVPSLRPGAACQMGTACAPATKTQFSVFFAA
LYLTSIGTGGVKAALLPFGAEQYDDDAERPERKQAFFSWFFAAINLGIFIAGTLISWLEQ
NVAWALGFGIGTACLLVAALAFVAGTPWYRVQMPAGSPLRDIIRVLVAAFRKRGARLERE
DGAPAALHEDAKDDEQRLARTKGLRWLDKAAVLAAKGEDAAAEGAWSLCTVSEVEGVKIL
VRMLPIWATCVLYAASLGQMTTTFIQQGMAMDARLGGRFKVPAASLVSVEVVFMLLWVAL
HDAAVIPLARRATGRPGGLTQLQRMGVGRLLVALALGTAALVERRRLRGVAAGGGGAAAM
SIAWQVPQFVLVAGSDVFCGIAQLEFFYGEAPPAMRSICSAFSFLALSLGFYVNSLVVTL
VAAATGRPGWLAPDLNAGHLDYYFWLWAVISVANLLLYMLLAARYTPKQVAVETAPRPTT
TGSTGDE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgagagaggagatgcccagtctcccctgctgctgcagccccagcctccgaac
cagacgcaggtttccccagcgaatcagcactataacaagcccttcagctggaaggctcct
gccattgttttggccttcgaattcttggagagcattgcttactctggcatagcgctcaac
ttggtcgtctatcttggaaccgtcctccatggaaccactgcctccagtgcagcaaacgta
gatgcgtggaatggcgccacgttccttacaccggtccttggagcctttcttgctgataca
tattggggaaagtacaagaccgtagcaatctctataatattctacgttggtgggttgctt
gtaatcaccgcctctgctgtcattccatccctacggcctgcctcttgtgaaggaggttct
tgcccacctgcaacggggtttcagtattttgtgctctttgcctcattgtacctcatctcg
atcggtacggggggcgtcaagtcagctctacttccctttggagcagaccaatatgatgat
tccaaccttgaagagagtaaaaacaagcaattgttcttcagttggtttttcattgctgtc
aacctcggagtgtttatctcgggcactgtccttgtctggatacagcaaaatgtcgcttgg
tcccttggatttggcatctccttgatctgccttctcattgcaacagtcgcctttttcatt
ggaacaccagcctacagggttcagcttccaactgggagcccgctgaagagcattgtaatg
gtatttgttgcctcctttaagaagagaagagtggcagttcctgctgatagcacgctgttg
tttgaaggggatgatgctgaatcgagcaacatggtaccaaacaaattagaacacaccaat
gaattcaggtgcttagacaaggctgctgtggttttagaggatcaagagattaagggcagc
cgccgtccatggatgctatgcacagtaactcaggtggaggaagtgaagatcctgatccgg
atgctcccgatatggttcacctgcgtcttctactcggccgcgatgtgccagaccgccaca
acgttcgtccagcaggggaatgcgatgaacaccaagatcgggtccttctcggtgccggcc
gcctccctgaactccgcggaggtcatcttcatgatggtctgggtggtgttccaggacagc
gtggtcatcccggtcgcgaggcggtacacgggcaaccccacgggcctgacgctgctgcag
cggatgggcgtggggcggctcctggcagtcccggccatggcagcggcggcgctggtggag
acgtggcggctgcgccgcgtgcgggccggcgggaacctgagcatcgggtggcagctcccc
cagttcgtgatcctggcctgctccgacgtgttctgcggcatcgcgcagctggagttcttc
tacgcggaggcgccgacgtcgatgcgcagcctgtgctcggcgttccagttcctggccatg
tcgctggcgtactacgtgaacacgctggtggtgtcagtggtggcagcggcgacgacggcg
ggcgggcggcccgggtggctccccgtgcacctgaacgacggccacctcgactactacttc
tggctgtggacgggcatcagcgcggtgaactacgccgtgtacacggcgttcgccaggcgc
tacacgctcaagaaggtggtccgtcagtacgtttggttttcacaagagtatttaaatggg
gaagaaaagagtcggggtggtcgtccctctcctcctcctgctagccagcctgcgtctcga
ggtcgttctgggaaggggacccgagtgaggtcactctctcctacggtgtttcaccgcagc
ggcatggcgcccactcccggcggcggctccaatggtcaccaccaccagcgccggcaacag
gtttcctccatggagtccggcggcgacgcgccggcagcggcgaggaggagcttcaactgg
aaggcaccggcgatcgtcctagtgttcgagctgctggagagcatcgccttctccggcgtg
gcgctgaacctggtggtgtacctggccacggtgctgcacgggagcaccgccttcaacgcc
gcccacgtcgacacctggaacggcaccaccttcatcgtccccgtcatcggcgccttcctc
gccgacagctactggggcaagtaccggaccatcctcgccgccatcgccttctacctcgtg
ggcctggtgctgctcaccgtgtccgcggcggtgccgtcgctgcggcccggggcggcgtgc
cagatggggacggcgtgcgcgccggcgaccaagacacagttctccgtcttcttcgcggcg
ctctacctgacctccatcggcacgggcggggtcaaggcggcgctgctccccttcggcgcc
gagcagtacgacgacgacgccgagcggccggagcggaagcaggccttcttcagctggttc
ttcgccgccatcaacctcggcatcttcatcgccggcacgctcatctcctggctggagcag
aacgtggcgtgggcgctcgggttcgggatcgggacggcctgcctgctcgtcgccgcgctc
gccttcgtggccggcacgccctggtaccgggtgcagatgcccgcggggagcccgctcagg
gacatcatccgggtgctcgtcgccgccttcaggaagcgcggggcgaggctggaacgggag
gacggcgccccggcggcgctgcacgaagacgccaaggacgacgagcagcggctggcgcgc
accaagggcctgcggtggctggacaaggccgccgtgctcgccgccaagggggaggacgcg
gcggcggagggcgcgtggtcgctgtgcacggtgagcgaggtggagggcgtgaagatcctg
gtccggatgctgcccatctgggcgacgtgcgtgctgtacgcggcgtcgctggggcagatg
accaccaccttcatccagcaggggatggccatggacgcgcggctcgggggccggttcaag
gtgcccgcggcgtcgctggtgtccgtggaggtggtgttcatgctgctgtgggtggcgctg
cacgacgccgccgtgatcccgctggcgcggcgggcgacgggccgccccggcggtctgacg
cagctgcagcgcatgggcgtggggcggctcctggtggcgctggccctgggcaccgccgcg
ctggtcgagcggcggcggctccgcggcgtggccgccggcggcggcggggcggcggcgatg
agcatcgcgtggcaggtgccgcagttcgtgctggtggcgggctccgacgtgttctgcggc
atcgcgcagctggagttcttctacggggaggcgccgccggcgatgcgcagcatctgctcc
gccttctcgttcctggcgctgtcgctgggcttctacgtcaactcgctggtggtgacgctg
gtggccgccgcgacggggcgccccggctggctggcgccggacctcaacgccggccacctc
gactactacttctggctctgggccgtcatcagcgtcgccaacctgctgctctacatgctg
ctcgccgcccgctacacgcccaagcaggtcgccgtcgagacggcgcctcgccccaccacc
accggcagcaccggcgacgagtga
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