Panicum virgatum (switchgrass): 120648295
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Entry
120648295 CDS
T07260
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase-like
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120648295
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120648295
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120648295
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120648295
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Prominin
Motif
Other DBs
NCBI-GeneID:
120648295
NCBI-ProteinID:
XP_039780951
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Position
9K:complement(11479904..11484489)
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AA seq
588 aa
AA seq
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MAIRAGRSALVALAFLLAASPCLQARVDQLYHGRQVSDWSRQINFELQNLSSSQKDGRHL
LASPKEITHRKLRARTGVRKKMEVVQQDDEALVKLENTGIERSKAVDSAVLGKYSIWRRE
NENEKADSRVRQMRDQMIMARIYSVLAKSRDKLDLYQELLARLKESQRSLGEATADAELP
KSALERMKAMAQVLSKARDLLYDCKAITERLRVMLLSADEQVRSLKKQSTFLSQLAAKTI
PNGIHCLSMRLTIDYYLLSPEKRKFPNSENLENPELYHYALFSDNVLAASVVVNSTIMNA
KEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLESAA
MKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQR
DLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSNPNISQNFDPNACGWAYGMNMFDLE
EWKRKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIER
SEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEHPYIHGCKISQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgattagggctggccgctccgccctcgtcgccctcgccttcctcctcgcggcctcc
ccctgcctccaagccagagtggatcaactttatcatggaagacaggtatccgactggagt
aggcaaatcaactttgaactgcaaaatttgtcctcaagtcaaaaggatggtcgtcatctc
ctggcaagtccaaaagagataacacacaggaaattaagggcgaggactggtgtcaggaag
aaaatggaagtagtgcagcaggatgatgaagccctagtgaaacttgagaacacaggcata
gaacgatcgaaagctgttgattctgctgtgctgggaaaatatagcatatggagacgtgaa
aatgaaaatgagaaggcagattcaagggttcgtcagatgagagatcaaatgatcatggct
aggatatattctgtgcttgccaaatccagggacaagcttgatctttatcaggaactgctt
gcaaggctcaaggaaagccaacgctcccttggggaagctactgctgatgctgaacttccg
aagagtgcgttggagagaatgaaagcaatggctcaagttctatcaaaagctagggattta
ttgtatgattgcaaggctattaccgagcgtttaagagtgatgcttctgtcagctgatgag
caggtccggagcttaaagaagcagagcaccttccttagccagttagcagctaagacaatc
ccaaatggcatccattgtctatccatgcgcctaacaatagactattaccttctctctcca
gagaaaagaaagttccctaatagtgagaacttggaaaatcccgagctttatcattatgct
cttttctcagacaatgttttggccgcatcagttgtggtcaactcaaccatcatgaatgcg
aaggagcctgaaaaacatgtatttcatctggttactgacaagttgaactttggggctatg
aacatgtggtttttgctgaatccgcctggggatgcaacaatccatgttgaaaatgttgat
gactttaaatggttaaactcctcttactgtcctgttctgaagcagctcgagtctgcagcc
atgaaagagtactatttcaaggctgatcgtccaaaaacactctctgctggttcctctaat
ctgaagtatcgaaacccaaaatatctgtccatgctcaaccatctaagattttacctccct
caagtctatcccaagttgaacaaaatccttttcctggatgatgacatagttgtccagagg
gatctgactggactctgggaggttgatcttaatggaaatgtaaatggggcggtggaaacc
tgtggagagagctttcatcgatttgacaagtacctcaatttctcaaatccaaatatttct
cagaattttgaccctaatgcatgtggttgggcttatggaatgaacatgttcgatctggaa
gaatggaagaggaaagatattactgggatttaccacaaatggcagaacatgaacgaaaac
aggctgctctggaaattgggtacactgccaccaggtcttctaaccttctacaagctgaca
caccctctggacaaatcatggcatgtgcttggcctagggtataacccaaccatcgagcgc
tcagaaatagacaatgccgcagtcatccactacaatgggaacatgaagccctggctggag
attgcaatgacaaagtaccgaccttactggacaaagtatatcaattatgaacatccctat
attcatggatgcaagatcagccaatag
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