Panicum virgatum (switchgrass): 120648405
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Entry
120648405 CDS
T07260
Name
(RefSeq) probable sodium/metabolite cotransporter BASS1, chloroplastic
KO
K03453
bile acid:Na+ symporter, BASS family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
120648405
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Motif
Pfam:
SBF
Mem_trans
Bile_Hydr_Trans
Motif
Other DBs
NCBI-GeneID:
120648405
NCBI-ProteinID:
XP_039781110
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Position
9K:18049528..18053897
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AA seq
420 aa
AA seq
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MTEYKYGKKSTDGQLLLRPAVQPLMPLLRTAPPAPAAAVTLPRCCLLTARSRLGSPSTPT
PLACLRLRPAAPIRGIPPRTGCRAAAANADADAAATKGPGGDGGARVALVRLGEALSLGF
PVWVASACAIALWRPPAFLWVGPTAQMLGISFTMLGMGMTLTLDDLKTALLMPRELAAGF
ILQYTVMPLSGYFVSKLLKLPDHYAAGLILVSCCPGGTASNIVTYLARANVALSVLMTAA
STFAAAFMTPLLTSKLAGQYVAVDPMGLFVSTSQVVLAPVLLGALLNQYCNGLVQLVSLL
MPFIAVATVAVLCGNAIAQNASAILSSGVQVVLSVGCLHACGFFFGYVLSRILGIDISSA
RTISIEVGMQNSVLGVVLATKHFGNPLTAVPCAVSSICHSVYGSILAGIWRSMPPTDKGE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtacaagtacggaaaaaagtcaacggacggccagttactcctccgtcctgcg
gtccagccactcatgcctctcctccgcaccgcgccgccggctccggccgccgcggtaacc
ctcccccgctgctgcctccttactgcccgcagccgcctcgggtccccctccaccccgacg
ccccttgcttgcctccgccttcgccccgccgccccgatccgcggcatcccgccgaggacc
gggtgccgcgcggccgccgccaatgccgatgccgatgcggcggccaccaagggtccagga
ggcgacggcggcgcgcgggtcgcgctggtgcgcctcggggaggcgctgtcgctggggttc
ccggtgtgggtggcgtcggcctgcgcgatcgcgctgtggcggccgccggccttcctctgg
gtcggccccaccgcgcagatgcttggcatctccttcacgatgctcggaatgggaatgaca
ttgactctggatgacctcaaaaccgcactattgatgcctagggagttagctgctggattt
atactgcaatacacggtgatgccactgtcaggatattttgtgagcaagctgttgaaattg
ccagaccattatgctgctggactgattttagtgtcatgttgccctggaggtacagcgagt
aacattgtgacctatttggcaagggcaaatgttgctctttcggtgctgatgacggcagca
agcactttcgctgcagctttcatgactcctctcctgacatccaaacttgctggacaatat
gttgcagtagatccaatgggactgtttgtgtcaacatctcaggttgtccttgcacctgtc
ctgctgggtgctctacttaatcagtactgcaatggtttggttcaattagtgtccctcctg
atgcccttcattgctgtagcaacagtagccgttctctgtggcaatgctattgcacagaat
gcttcagctatcctgtcatctggggtgcaagtagttctatctgttggttgcttgcatgca
tgtggctttttcttcggctatgttctttccagaatacttggcattgatatctcttcggca
agaacaatctctatagaggttggcatgcagaactctgtgttgggcgtagtccttgcaacc
aagcatttcggtaatcccctcacggcagttccatgtgctgtttcaagcatctgccactca
gtctacggcagcattttagctgggatctggaggtctatgccccccaccgacaagggagaa
tga
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