KEGG   Panicum virgatum (switchgrass): 120648419
Entry
120648419         CDS       T07260                                 
Name
(RefSeq) DNA excision repair protein ERCC-1-like
  KO
K10849  DNA excision repair protein ERCC-1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03420  Nucleotide excision repair
pvir03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120648419
   03460 Fanconi anemia pathway
    120648419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120648419
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120648419
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC UPF0758_N
Other DBs
NCBI-GeneID: 120648419
NCBI-ProteinID: XP_039781131
LinkDB
Position
9K:18179710..18182723
AA seq 393 aa
MDGGGGQQGPPERQPGKNLIKIPSYQEVFGTGASSSSSTPPSYNPPLSSTGAPAAPSSSS
SSGSFSQAFSFLKSSEFYSPPPPPPQPTSTPRPPQASSSAPVAQTQSKSTILVSHRQRGN
PLLKHIRNARWAFADVVPDYVLGQSSCALYLSIRYHLLHLDYLYYRIRELQNNFRLRVIL
CHIDVEDVVKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVYENKPADNIREHMDND
YLSRLTHALTSIRHVNKTDVVTLGSSFGSLSQVMNASMEELARCPGIGERKVKRLYDTFH
EPFKRVSTRPNLVVPDTPDREKASGQPSSTNDRSENTAEKPEASKKKGPDVRSALTAAFA
KYSEKMRSQSRDTANKAGEGGSSSNMEDDQTKY
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggacgggggaggagggcagcaggggccgccggagcggcagcccggcaagaacctcatc
aagatcccgtcctaccaggaggtcttcggcactggcgcatcctcctcctcctcgacgccg
ccctcctacaaccctcctctaagcagcaccggcgcccccgctgctccatcctcctcttca
tcgtcggggtcgttctcgcaggcgttctccttcctcaagtcctccgagttctactcgcct
cccccgccgcctccccagcccacctccaccccgaggccgcctcaggctagctcatccgcg
ccggtagcccagacccagagcaagagcacaattctcgtcagtcataggcagagagggaac
cctctgctgaagcacatcaggaatgctaggtgggcgtttgccgatgtcgtgccggactat
gtgctcggtcaatcgtcatgtgcgttgtacttgagtatcaggtaccatcttctacatcta
gattacttgtattatcggataagagaactgcaaaataatttcaggctgcgtgtcatcttg
tgccatattgatgttgaagatgtagtcaagcctctgcatgaaattacaagaacagcattg
cttcatgactgcaccctcctgtgcggttggagcctggaggaatgtggtcggtacttggag
actatcaaagtgtacgaaaacaagccagctgacaatatccgtgagcacatggataatgac
tatctatcacggttgacacatgcacttacatccattcggcatgttaataaaacagatgtt
gtcacacttggttcatcttttgggtcactctcacaagttatgaatgcttctatggaagag
ctggctcgttgcccaggaattggtgagcggaaggtaaaacgactttacgatactttccat
gagccgttcaaacgggtttccacccgcccaaaccttgtagtccctgatactcctgacaga
gagaaagcatcaggtcaaccttcatcgacgaatgatagatcagaaaacacagcagagaaa
ccagaggcatccaagaagaaaggtcccgatgtgaggtcggcccttaccgctgcctttgcc
aagtattcggagaagatgcgcagccagagccgtgacaccgccaacaaggctggtgaaggt
ggtagcagctcaaacatggaagatgaccagaccaaatactag

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