Panicum virgatum (switchgrass): 120648420
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Entry
120648420 CDS
T07260
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120648420
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
LRR_8
LRR_4
DUF3452
NACHT
AAA_14
AAA_16
AAA_22
ATP19
Motif
Other DBs
NCBI-GeneID:
120648420
NCBI-ProteinID:
XP_039781135
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Position
1K:complement(7521475..7525317)
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AA seq
915 aa
AA seq
DB search
MAEAAVLLALSKLVTSFGIASLQAFIKKETNLSQDLPRIANRIERELDMIHHFLSQVGTK
IYSNKVLEGWIVRVRKVAYCVEDIIDEYCYNITLLQEEGYFKRVIHKTYYANAFHSIALR
MKDIEEEMKHLSQLKRDYREMFNELLDNTSYNTQIQSPKYNENLHAIKVDDIVGMKKDME
LLDKWLDPKELNRVVVSVWGFGGLGKTTLVRKVYDWEMGLKSFDSYAWIAVSHNFNIRVT
LRQLIQELNEYQGKIPADLGTMHCDKLTDALRVVLSNKRYLIVLDDVWDTRAFNELSDSL
VDDHKGSRIIITTRNNDVASLAQETYRMKLNPLGADDAFELFCRRTFQNSNMKCPSHLKE
LSGQIVSKCGGLPLAISAIGNVLAVQEPDEITWRRMDNQFKCELEDNPSLGKVRGALSIS
FAYLPRHLKNCFLYCSMFPQDYLFRREQLVKLWIVEGFVSHRGQSTLEEVADGYFTELIH
RSMLQLVENDEIGRVVACRMHDIVRELALSFSRKERFGLADISNLALENKDDVRRLLVST
SNQVNQLTRSRMDLPHLRTFIATSKVANYQLLCLLISNYKYLAVLELRDSPLDKIPDNIG
ELFNLRYLCLRRTRVKSLPRSIKRLSNLETLDLKSTGIETLPKEVARLKKLRHIFAEKLA
DPKQQHLRYFQGVKFPDGIFDLVQLQTLITVEATKKSVELLKRLPELRLLCVENVRRADC
TILFASISNMHHLDSLLISASDQDEPLNFDAFNPIQTQLEKLTIRGCWDNETFRRPVFRE
YGINIKYLTLTFCKNNADPLPSISSSMPNLIFLSIRRGCWSDDIMLCAGWFPQLKTLYLE
KLHQLKRLFIEEGALVRLEVLILLSLTSLKEVPKGLELVSSLKKLNVSMQPPEFKVEWER
DNWRMKLHHVQEIRV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagcagtactcctagctcttagcaagcttgttacgtcttttggaatagca
tcactgcaggctttcataaagaaagaaaccaacctgtcgcaagatctaccaaggattgca
aatcgcattgagagggaattggacatgattcatcatttcttgagccaagttgggaccaaa
atctacagcaacaaagttcttgaaggctggatagtgagggtgcggaaggttgcttattgt
gtcgaggacataatcgatgagtactgctataacattactctcttacaggaagaagggtat
ttcaagagggtgatacacaaaacctactatgcaaatgcttttcacagcattgctttaaga
atgaaagacattgaggaagagatgaaacacctttcacagctaaaaagagactacagagaa
atgttcaatgaattacttgacaacacaagttacaatactcaaattcaatcccccaaatat
aatgagaaccttcatgccattaaagtagatgacattgtagggatgaagaaagatatggaa
ctgctagacaaatggctagatcccaaggaattgaatcgggtagtagtatcagtgtggggt
tttggtggattaggtaaaacaaccctagtcaggaaggtatatgactgggagatgggactg
aaaagttttgattcttatgcatggattgcagtatctcataatttcaacattcgtgttaca
ttgaggcagttgattcaggagctgaacgagtaccaaggcaaaattcctgccgaccttggt
actatgcactgtgataagctcactgatgcattaagagtagtgttgtcaaataagaggtac
ttgattgtacttgatgatgtttgggatacaagagcttttaacgagttatctgactcgctg
gtggatgaccacaaaggaagtcggataattatcacaaccaggaataatgatgttgcttca
ttggctcaagaaacgtacaggatgaagcttaacccactcggtgctgatgatgcatttgaa
ctcttttgtagaaggactttccagaatagcaacatgaagtgcccctctcatctcaaggaa
ctgtctgggcagattgtgagcaaatgtggagggttgccactagcaattagtgcaatagga
aatgtattagctgtacaggaaccagacgagataacatggagaagaatggataatcagttt
aagtgtgagttggaggacaaccctagccttggcaaagtaaggggtgcactgagcattagc
ttcgcgtaccttccaagacacctcaagaactgctttttgtattgcagcatgttcccacaa
gattatcttttcagacgtgaacagcttgtcaagctatggatagtagagggttttgtttca
cacagagggcaaagtacattggaggaggttgcagatggctacttcactgagctgatccac
cgaagcatgctgcaacttgtggagaacgatgagattggcagagtggtagcctgcaggatg
catgacattgtgcgagaattagctctttccttttctaggaaggaaagatttggtctggca
gacatatcaaacctggcacttgagaacaaggacgatgttcgtcgattattagtgtcaacc
tctaatcaggtgaatcagctgacaagatcaagaatggatcttccacatcttcgaacattc
atcgcgaccagcaaagttgcaaattaccagctgttatgcttactgatttccaactataaa
taccttgctgttctggagctgcgagactcgccccttgacaagatcccggataatattggg
gaattgttcaacttgcgctacctttgcctaaggagaacacgtgttaagtcccttccaaga
tcaattaaaaggctttccaatttggaaactctggacctgaagtcaactggcattgaaact
ctcccaaaagaggtagccaggctcaagaagttaaggcacatatttgctgagaaattggct
gacccaaaacagcagcatttacgctacttccaaggtgtgaagtttccggatggaattttt
gatttagtacagctgcaaactctcattactgttgaagcaaccaagaaatcagtggagctg
ttgaaacgcctgcctgagctgaggcttctgtgtgttgagaatgtacgtcgtgctgattgc
acgatactgtttgcatccatctcaaacatgcaccacctcgatagcttgctcatcagtgcc
agcgatcaagatgaacctctgaatttcgatgcattcaatcctatacagacacagctagag
aagctcactatcagaggatgctgggacaatgagaccttcaggagaccagtgttccgtgag
tatggtatcaatatcaagtatctgacattaactttttgtaaaaataatgccgatccactg
ccctcaatctcatcgagcatgcctaaccttatattcttgagcatccgcaggggatgctgg
tctgatgacataatgctatgcgcgggatggtttcctcagctgaaaaccctttatttggag
aaactacatcaactaaaaagactgtttattgaggaaggtgcccttgtcaggcttgaagtg
ctgattctgttgtctctaacatctctcaaggaagttcctaaaggtttggaacttgtttca
tccctcaagaagcttaatgtctcgatgcagccccctgaattcaaggtagaatgggaaaga
gacaactggaggatgaagttgcaccatgtccaagagatacgtgtatga
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