KEGG   Panicum virgatum (switchgrass): 120648453
Entry
120648453         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120648453
  09124 Replication and repair
   03420 Nucleotide excision repair
    120648453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120648453
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120648453
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120648453
  RNA polymerase III system
   RNA polymerase III
     120648453
  RNA polymerase I system
   RNA polymerase I
     120648453
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120648453
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 120648453
NCBI-ProteinID: XP_039781166
LinkDB
Position
9K:1013454..1016547
AA seq 146 aa
MPEHLFQDSFIVIGLDPDGKKFDKVSRVEAESEDSSIYMQLDVAIEVYPMQKGEKFKMVL
ASTLNLDGTPDTGYFTQASRETLADQFEYVMHGKLYRISDYTTPKQDPKVEIFGSFGGLL
MLLRGEPSIAGSFELDQRIFLLIRKV
NT seq 441 nt   +upstreamnt  +downstreamnt
atgcccgagcatctcttccaggactccttcatcgtcatcgggctcgatcctgatggtaaa
aagttcgacaaagtttctcgtgtggaagctgagagcgaggattctagtatatatatgcag
ctagatgttgccatagaggtttatccaatgcaaaaaggcgagaaatttaaaatggtccta
gctagtactctgaatttggatggcactccagatactggctacttcacacaggctagccga
gaaacgctggctgaccagtttgagtatgtcatgcatgggaagctatacagaatctcagat
tacaccacccccaaacaagatcctaaagtggagatttttggatcattcggtggtctcctg
atgctgctcaggggtgaaccttccattgctggtagctttgagctggatcagaggattttc
ctacttatacgcaaggtgtag

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