Panicum virgatum (switchgrass): 120648535
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Entry
120648535 CDS
T07260
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120648535
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120648535
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120648535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
FYRN
FYRC
Bromodomain
Phage_zn_bind_3
KIAA2026_hel
zf_RING-like
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
120648535
NCBI-ProteinID:
XP_039781224
LinkDB
All DBs
Position
1K:7623707..7647285
Genome browser
AA seq
2135 aa
AA seq
DB search
MDRPPHLDIDLNEAPSPPPSEPPTPRGPSPPQELAPPAYAAPPPPPPPPPQPQLPPPPLL
PLVAPSPQQQLRLQQEALEVVLRLHRPPELRSTPFGPIGSVPAGLLPGLGLPLPAPHPGE
AGWGYPPPLCASCAGQEKLGKTFVCDACDRGFHSDCVRVWPPLPPPPPPPGPPGARRPCA
ATNEDWICPECEMRGARSTRWKLGPVPLDINAAPPEEPIAVPAHDISRTNISGGAQLSVA
RLPHFEGVRLNNTALYDGMQFMPQFDLAHCLGTRQKFASMDRDLNADENVPQRPIHLRKR
RDLPQTSTLPMVAENHEFGNPSIFMDPSFIAKAMEQSTIENGSSLKPPKFLVEKSNHQPH
HRTVVLPVQYSDFFITSLGEIDNRTSYHNSYQIWPVGFTSYWHDRVTGSLFECEVCDGGN
FGPIFKARRLPCSVFQLPEASTTVCPNVVRKADTVETKESSGAVEDTANDTDDNISMLLS
NFSETNQDFMSCLSNNMKGKENLGCSNVQTLNMTVSAALSDSGSFSWAQTKDANLQDKIG
DFTYEGTTPSSVWRMIYCAMMEACEKMYKEHGHLVLFCTHGSEKTSFDYGSGSQNIDSPC
NLLTRFCSSNGPKIPRFIEKENDVESTCALLKEWLYQDRIGLDLEFVQEIVESLPKSRAC
SNYQFLCNRTGFNSSLTIASGALLAVNKSSPSSGDVMSYGRHGSMVTGPQDHAQPSSFSI
RELPPGNPFSRKLPPELAGDLFQILEFLGRFAEIIGLKELPSVEQLEDELIDPWPICANQ
KDIQHHRDHTPPMNSPANVSTSYSNGESGLTTNEETASVFIPVETSSTSVAAQDKLAAET
LGRCSGVVLPEIHLALLKVLFTELVPRVAIFVDPRIDSKESKSKRGRKRDTDTLTRELKI
DMLTANILTWPELARRYIVAVSSLSGCMDLSDISSREGVKLFRCLQGDGGILCGALPGVV
GMEKDASLLAEAETLICNSSVNEGNKVFMMDYKDSDIVDSPEEPACDTALPDWVKSLEPV
RKLPTNVGTRIRKCVYEALERKPPEWAREILEHSISKEVYKGNASGPTKKAVLSVLAEAC
RKKVPQNPEKPRKERNIICISEAILKKCRIVLRRAISSDESKPFGNLLGTTLTNSNENED
EGILGFPGMVSRPLDFRTIDIRLAMGTYRGSLEAFLDDVQEVIHNLQTAFGDRPEVLVMV
AALSQSFESFYKAEVQDLIQKFDKYLSNGNGNSEIHDELQDILMAANNKLPKAPWEDGVC
KVCGIDRDDESVLLCDNCDSEYHTYCLNPPLARIPIGNWYCPSCLSGQKEPNVDHDTHVL
MQEQDKCVGEEARVLLERLNKLAMAMDEKEYWELSIPERIYLLKFLCDELLNTALIREHL
DQCSDKSNDLQQKLRYLNYELKELKYQLETRTSYATQSRWMKNDHVSNSSGLVENQQRAM
PTTSEHLEEAERVNVGVNLNTPAEGAPTGQLNVGKPHSADNDISSTSVIEGNKSLGLSKQ
TSDVVIDQIDGGSIGEVSQSFEKSVGDINMGEAHSATVVNAPNGELPDENARTPSQDNLE
ASMTKLDDHDNLEASTTKLADHDADKNETNNLLDRISQLQDSISTAELQLSMASLRRECL
GRDSVGRLYWVTGRPGRRPRLIADGSMLIPKDRDISMVTSYPQSTFDCRGWNSASIVVYE
SDEEIKCLVDWLRDTDPREKDLKDSILHWQKSLYHQASFHVSDPPVSNSSKSEPLRDLPD
TKAFIVLEQKYGLQLDQDTSELSKRRGRKTKLGSEERIYRCDCLELVWPSRHHCLTCHET
YPTSAEYEGHNGGKCNSSDDSPNESKENDEPKLKGTKSDIKGKDPVDHICSAEPSNNGKL
DPCPFDFEEICRKFVTNDSNKETVKEIGLLGSNGVPSFVPSPAFFVDPPALLSKNKRNDD
DIPNDWTSSLEECQAMSAKKSGQEVSQAAQDCPGNASDEQMPKSKRPVRDSTSAKEASSS
TDKPTRLLTINGGLVPESSLMPVIGRNFHILKQLKINLLDVEAALPEEALRASKSQQIRR
RSWRAFVKSAESISHVVLATNFLQSMIKAEFLKKDWWYWSSFTAAIKTTTVTALALRIYT
LDDCIMYTKDPAPNPEPADNSRSGNKGKRKRDADS
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcccgccgcatctcgacatcgacctcaacgaggcgccgtccccgccgccgtcc
gagcccccgacgccgcggggcccgtcgccgccgcaggagctcgctccgcccgcctacgcc
gcgcccccgcccccgcccccgcccccgccgcagccgcagctccctccgccccctctgctg
cctctggtggcgcccagcccgcagcagcagctgcggctccagcaggaggccctcgaggtg
gtgctgcggctccaccggccgcccgagctgaggagcaccccgtttgggcccatagggagc
gtgcctgccgggttgctccctggcctggggctgccgctgccggcgccgcaccctggggag
gccggctggggctacccgcctccgctctgcgcctcctgcgccggccaggagaagctgggg
aagaccttcgtgtgcgacgcctgcgacagggggttccattccgactgcgtccgcgtctgg
ccgcctctcccgcccccgcccccgccgcccggcccccctggcgcgcggcggccctgcgcc
gcgaccaacgaggactggatctgccccgagtgcgagatgcgtggcgctcgctccacccgc
tggaagctgggtccagtcccgcttgacatcaacgctgccccgcccgaggaacccatcgca
gtccccgcccacgacatcagcagaacaaatatctctggtggagctcagctgagtgttgcc
agattaccgcattttgagggggttcgcttgaacaatactgctctttatgatgggatgcaa
tttatgccacaatttgatcttgctcattgtcttggcacgagacagaaatttgcttccatg
gaccgagatttaaatgctgatgaaaatgtaccacaaaggccaattcatttacgcaaaaga
agagatcttccacaaacatcaacattacccatggttgctgagaaccatgagttcggaaat
cccagcatttttatggatccatcctttattgctaaggcaatggaacaaagtactattgaa
aatggaagttcgctaaagcctccaaaatttcttgtggagaaaagtaatcatcagccacat
catcgtacagttgtgctacctgttcaatatagtgatttctttattaccagtttgggagaa
attgacaatcggacaagctaccataattcgtaccagatatggccggttgggtttacttct
tactggcatgatagagttactggttcactgtttgagtgtgaggtatgtgatggagggaat
tttggacctatatttaaggcgagaagattaccgtgttcagtgttccaacttccggaggca
tcaaccacagtgtgcccaaatgttgtgaggaaggctgatacagtagaaacaaaggaaagt
agtggtgctgttgaagatactgcaaatgatactgatgataatatttccatgctcctatca
aatttctctgagacaaaccaagatttcatgtcatgtctcagtaacaatatgaagggtaaa
gagaatttagggtgcagtaatgtacaaacgttaaatatgacagtgtcagctgcactgtca
gattctggatctttcagttgggcacagactaaagatgcaaatctgcaagacaaaattggt
gactttacatatgaaggaacaacaccttcctcagtctggaggatgatctattgtgctatg
atggaagcttgtgaaaaaatgtacaaggaacatggccatttggtattgttctgcacacac
ggtagtgaaaaaacttcatttgattatgggagcggatctcagaacattgacagtccttgc
aatctattgactagattttgctcatcaaacgggcccaagataccacgattcatagaaaag
gagaatgatgtggaatcaacttgtgcattacttaaagaatggttgtatcaggacagaatt
gggttagatttggaatttgttcaagaaattgtggaatctcttcctaaatccagggcttgt
tcaaactatcagttcttgtgtaacaggactggttttaactcttcactgacgattgcaagt
ggcgcactgttagctgttaataaaagtagtccaagcagtggggatgtcatgtcatatggt
agacatggatctatggtgactgggccacaggatcatgctcagcctagctcttttagcatc
cgtgagcttcctccgggaaatccttttagccgcaagcttccaccagaattggcaggagat
cttttccagatattggagtttcttggacgatttgctgaaattattggcctcaaagaactt
ccttcagttgagcaattagaagatgaacttattgacccatggccaatttgtgcaaatcaa
aaggacattcaacaccacagggatcatactccaccaatgaattcacccgctaatgtttct
acatcatattcaaatggtgaatcaggtctaactactaatgaagaaacagcatctgtgttt
attccagttgaaacttcttcaacaagtgtagctgctcaagataagttggctgctgaaaca
cttgggagatgtagcggtgtagtgttgcctgagattcaccttgcactcttgaaggttctt
tttactgagctagtgccgagagttgcgatttttgtggatccaagaattgattcgaaggaa
tcaaaatccaaacgtggaagaaagagggacactgatactctaacaagagaattaaagatt
gatatgctgactgctaacatattaacatggccagagttggctagaaggtatattgtagct
gtttcttccttgagtggctgcatggatttatctgatatttctagtcgagaaggagtgaaa
ttgttccgctgcctacaaggtgatggtggtatcctgtgtggagcactacctggggttgtt
ggcatggagaaggatgcatcgctgcttgcggaggctgaaacattgatatgcaattcttca
gtaaatgaagggaataaggtctttatgatggattataaggacagtgatattgtagactcc
cctgaggagcctgcttgtgatactgcattaccagattgggtgaaatctctggagcccgtg
agaaaattgcctactaatgtaggaacaagaataagaaagtgtgtttatgaagctttggag
aggaaacctccagaatgggcaagggaaattttggagcattcaatcagtaaagaggtctac
aagggtaatgcatctggaccgaccaagaaagctgtcttgtctgtcttggcggaggcctgt
cgtaaaaaagtaccccagaatccagaaaaaccaagaaaagagagaaatattatatgtatc
tcagaggctatattgaaaaagtgccgtattgtcctgcgacgtgctatttcctccgatgaa
tcgaagccttttggcaatttgcttggaacaactctaacaaattccaatgagaatgaggat
gagggcattcttggatttcctggtatggtatctcgccctttggatttccgcacaattgat
ataaggttggctatgggaacctatcgtggatccttggaggcttttcttgatgatgtacaa
gaagtaatccataatctgcaaactgcatttggtgatcgacctgaagtgctggtaatggtt
gcagcgctgtctcagagttttgagtcattctataaggcagaggtacaagaccttattcaa
aaatttgacaagtatctaagcaacgggaatggtaattctgaaatccatgacgaattacaa
gatattctcatggcagcaaacaacaagctgcccaaagctccatgggaggatggtgtctgc
aaagtctgcggcatcgatcgagatgatgaaagtgtccttctgtgcgataattgtgactct
gaataccacacttattgcctgaacccaccactggcacgcataccaattggaaactggtat
tgcccgtcatgtttgtcaggacaaaaggaaccgaatgttgatcacgatactcatgtttta
atgcaagaacaagacaagtgtgttggggaggaagctcgtgttttgcttgagaggctcaac
aagttagctatggccatggatgagaaggagtactgggagcttagcataccagagaggata
tatttactgaaatttttatgtgatgaattactcaacacagctctaatcagggaacaccta
gatcaatgttcggacaaatcaaatgatctccagcagaagttacgttatctcaattatgaa
ctgaaagagttgaagtatcagttagaaacaagaacttcatatgctacacaaagtagatgg
atgaaaaatgatcatgtaagcaatagttcaggactagtggagaatcagcagcgtgctatg
cccacgacatcagagcatcttgaagaggctgaacgggttaatgttggagttaacctaaac
acccctgctgaaggggctcctactgggcaattgaatgtgggtaaacctcacagcgctgac
aatgacatatccagtacatctgttattgaaggaaataaatctttgggactttcaaaacaa
acatcagatgtggttattgaccagattgatgggggctctattggtgaagtgtcccaaagt
tttgagaaatcagtaggtgacatcaatatgggagaggctcattctgctacagttgtcaat
gcaccaaatggagagttgcctgatgaaaatgctaggacaccatcccaagataaccttgaa
gcgtcgatgactaaattggacgaccatgataaccttgaagcatcaacaactaaattggct
gaccatgatgctgataaaaatgaaacaaataatttattggataggatttcacagttgcag
gattcaattagcacagcagagttacagctcagtatggcatccttgagaagagaatgcctt
ggaagggattctgtgggtcgattgtactgggttacaggaagacctggtagacgtcctcga
ctgatcgctgatggaagcatgctgatacccaaggacagagacattagcatggttaccagc
tatcctcagtctacatttgattgtagaggctggaattcagcatcaattgttgtatatgaa
tctgatgaagaaatcaagtgtcttgttgactggctaagggacactgatccaagggagaag
gacctgaaagactctatcttgcactggcaaaagtctctttatcaccaggctagttttcat
gtcagtgatcctccagtgtccaactcttcaaagagtgaaccacttagggaccttccagac
accaaggcatttatagttctggagcaaaaatatggcctgcaattggatcaagacactagt
gaactatccaaaaggagaggaaggaagacaaagttgggttctgaagaaagaatatatcgc
tgtgactgtttagaactggtatggccttctcgacaccattgtttaacttgtcatgagact
tatcccacatcagcagaatatgaagggcataatggtggaaaatgcaacagcagtgatgac
tctcctaatgaaagcaaagaaaatgatgagccaaaactgaagggtaccaagtctgatata
aagggaaaagatcctgtagatcatatttgttccgctgagccatctaacaatggaaaattg
gatccatgcccttttgactttgaagaaatttgtagaaagttcgtcacaaatgattcaaac
aaggagacggtgaaggagattgggctccttggatcaaatggagttccatcgtttgtccct
tcacctgcatttttcgttgaccctccagctctactaagtaaaaataaaagaaatgatgat
gatatcccaaatgattggacttcctctttggaggaatgccaggcaatgtccgccaaaaag
tctgggcaagaggtatcccaagctgctcaagattgtcctggcaatgcaagtgatgagcaa
atgccaaaatctaaaaggcctgttagggattctacttcagccaaggaagcatcttcttca
acagacaaaccaacaagattactaacaatcaacgggggcctggttccagagtcatcattg
atgcctgtgataggcaggaactttcatatcctgaaacagctaaagataaatttgcttgat
gtagaagcagctttgcctgaggaagcattgagagcctcgaagtctcagcaaataagaaga
cgttcatggcgtgcttttgtgaagagtgcagaatcaatatctcatgtggtattggcaacc
aacttcttgcagagcatgataaaagccgagttcctgaagaaagattggtggtactggtcc
tccttcacagcagctatcaagacgacaaccgtaacagcgctcgcgctcaggatctacacc
cttgacgactgcatcatgtacacaaaagatccagctccaaaccccgagccagctgacaat
tcaagatctggaaacaaggggaagaggaagagagatgctgattcatga
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