Panicum virgatum (switchgrass): 120648749
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Entry
120648749 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 49-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120648749
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120648749
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120648749
NCBI-ProteinID:
XP_039781357
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Position
9K:complement(48919723..48922420)
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AA seq
570 aa
AA seq
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MCEGLFSQLLPPCPCNAKDGGAGDGRRVGAVAASPDVAVGVADDAAATWKDPQPVLADRP
PWLTRGGAASEAASILRLSLPMIMTGLILYVRPMISMLFLGRLGELALAGGSLAIGFANI
TGYSVLSGLATGMEPVCGQAVGARNLPLVGATMQRMVLLLLAVSVPVAFLWAHMEPLLLL
CGQDAAIAAAAQRYILLCLPDLLFQSFLHPLRIYLRTQSINLPLTACAVLAVAMHLPVNY
ALVSVLGFGVEGVALASALANLNLVLLLLAYVYISGVHRATGGFTALSEKLFKDVTGWVR
LARLAAESCASVCLEWWWYEIMILLCGLLANPKATVASMGVLIQTTSLLYIFPSSLSFGV
STRVSNALGANRPGAARAAARAGLALSALQGLASFLFAVSVRGVWARMFTSDAAILALTA
SVLPILGLCELGNCPQTAGCGVLRGSARPRDGARINLGAFYGVGTPVAVALAFWAGQGFR
GLWLGLLAAQAACVAVMLVVISRTDWPRQAELAQVLAGVAAPLDGDGDGDGGRADVNGDD
DGGKNMAPRVNVAAPHGDEDSSSLLITVQG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggggctcttcagccagctgctgccgccgtgcccgtgcaatgccaaggacggc
ggcgccggggatggccgtcgggttggtgcggtcgccgcctctccggacgtcgcagtcggt
gtcgcggacgacgcggcggcaacgtggaaggacccgcagccggtgttggccgacaggccg
ccgtggttgaccaggggcggcgcggcgagcgaggccgcgtcgatcctgcggctgtcattg
ccgatgatcatgacgggcctcatcctctacgtccggccgatgatatcgatgctcttcctc
ggccggctcggcgagctcgccctcgccggagggtccctcgccatcggcttcgccaacatc
acgggctactcggtcctctccggcctcgccacggggatggagccggtgtgcgggcaggcc
gtcggcgcccggaatctccccctcgtcggcgccaccatgcagcggatggtgctcctcctc
ctcgccgtgtccgtgcccgtcgccttcctctgggcgcacatggagccgctgctcctgctc
tgcggccaggacgccgccatcgccgccgccgcgcagcgctacattctgctctgcctcccg
gacctcctcttccagtccttcctccaccctctccgcatctacctccggacccagtccatc
aacctcccgctcaccgcctgcgctgtgctcgccgtcgccatgcacctccccgtcaactac
gccctcgtctcggtcctcggcttcggcgtcgaaggcgtcgccctcgcctccgccctggcc
aacctcaacctcgtgctcctcctcctcgcctacgtctacatctccggcgtgcaccgcgcc
accggcggtttcactgctctctccgagaagctgttcaaggacgttaccgggtgggtgcgg
ctggcccggctcgccgccgagagctgcgccagcgtctgcctcgaatggtggtggtacgag
atcatgatcctcctctgcggcctcctggcgaacccgaaggccaccgtggcgtccatgggc
gtgctcatccagaccacgtccctgctctacatcttcccgtcctcgctcagcttcggcgtg
tcgacgcgcgtgagcaacgcgctcggcgcgaaccggccgggcgccgcgcgcgccgcggcc
cgcgcggggctcgcgctgagcgcgctccagggcctggcctccttcctgttcgccgtgtcc
gtgcgcggcgtgtgggcgcgcatgttcacgtcggacgcggccatcctggcgctcacggca
tcggtgctgcccatcctcgggctgtgcgagctcggcaactgcccgcagaccgccgggtgc
ggggtgctccgcgggagcgcgcggcccagggacggcgcgcgcatcaacctcggcgcgttc
tacggcgtgggcacgcccgtggccgtggcgctggcgttctgggcgggtcagggcttccgg
ggcctctggctcggcctcctcgcggcgcaggccgcctgcgtcgccgtgatgctggtggtc
atctcccgcacggactggcccaggcaggccgagctcgcgcaggtgctcgccggagtcgcc
gcgcccctcgacggcgacggcgacggcgacggcgggcgcgccgatgtgaacggagacgac
gacggtgggaaaaacatggcgccgcgtgtcaatgttgcggcgccccatggcgacgaggac
tcgagcagcctgctcatcactgtgcagggctga
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