Panicum virgatum (switchgrass): 120648810
Help
Entry
120648810 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 homolog A-like isoform X1
KO
K03028
26S proteasome regulatory subunit N1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120648810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120648810
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120648810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120648810
NCBI-ProteinID:
XP_039781428
LinkDB
All DBs
Position
1K:3736432..3743014
Genome browser
AA seq
890 aa
AA seq
DB search
MAPPEHPTPAAPSEHSQPPPPAAAAKGKGKKKDDDDLSEEDQALKEQLELYVLRAQDADP
GVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMPESEMKKYMADILSV
LALTMSIEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDDLPIDALMEL
VQQIISFHMKHNAEPEAVDLLMEVEDLDLLVEHVDTTNYKRACLYLTSSSKYLPAPDDML
ALDIAYTIYMKFGDLASALRIALQLEKPMQYVKQVYTSTDDFLLKKQFSYIIARHGLAME
IDDEIAADDNDKEILQEIVNNTKLSEGYLTLARDIEVMEPKSPEDIYKVHLIDGRGASSS
LDSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSSSGSSGNWLFKNKEHGKASAAASLGM
ILLWDTDSGLAQLDKYLHSNDTHVVAGALLGIGIVTCGVKNDCDPALAILMEYIGKDDSN
IRIGAILGLGIAYAGSQKEELKTHLSAVLGDSQSPLEVLVFSAIALGLVFVGSCNEEIAQ
SIIFALMERSEAELAEPIIRLLPVALGLLYLGKQESVEATAEVSKTFDEKIGKYCDVTLM
SLAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIAMAEELGAEMAVRSLERLL
QYGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADVSMAAIISLGLIGAGTNNA
RIAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPMALGGLVTV
LHACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLSVPVRVGQAVDVVGQAGRP
KTITGFQTHSTPVLLAAGERAELATEKYIPLTPVLEGFVILKKNPEYHEE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggagcaccccacccccgccgcgccgtcggagcactcgcagcctccgccg
ccggcggcggcggctaaggggaagggcaagaagaaggatgacgacgatctgtcggaggag
gatcaggcgctcaaggagcagctggagctgtacgtcctgcgggcgcaggacgcggatccc
ggtgtgcagaagctcgccctcgagagcatgaggcaggagattcgttctgccacaagctca
atgacttctgttccaaagccgctgaaatttctccgcccgcactatggaaccctcaagtcc
tactttgagaccatgccagaatctgaaatgaagaaatacatggcggacattctgtcggtg
ttagctttgacaatgtccattgaaggagaaagggagtccctgaaatatcgtttattgggc
tctgaaggagacatcggttcatggggtcatgaatatgtaagaaatttggctggcgagatt
gcacaagagttccaaaagcgtcaggatgatgacttgcccattgatgccttaatggagctc
gtgcagcaaattatttcatttcacatgaagcataatgctgaacctgaagctgtagatctt
ctaatggaggttgaagaccttgatttgctagttgagcatgtggacactacaaactacaaa
agggcttgcttgtaccttactagttcgtccaaatatcttcctgctcctgatgatatgttg
gcacttgacatagcatataccatctacatgaagtttggagaccttgcaagcgctttgaga
attgctctgcaacttgaaaaacccatgcagtatgtgaagcaagtctacacatcaactgat
gattttctgctcaagaaacaattctcatacatcatagcacgccatggtttggctatggag
attgatgatgaaatagctgctgatgacaatgacaaggagattttgcaagaaatagttaat
aatactaagctgagtgagggataccttactcttgctcgcgatattgaggtcatggagcca
aaatctcctgaggatatatataaggtccatttgattgatggccgtggcgccagctccagt
cttgattctgcaagacagaatttggctgcaacatttgtcaatgcatttgtgaatgctggg
tttggtcaggacaagttgatgactgctccatctgattcgtccagcagtgggtcttccgga
aactggttattcaagaacaaggaacatggaaaagccagtgcagccgctagtctgggaatg
attctcctgtgggatactgattctgggcttgctcagcttgacaaatacttgcatagtaat
gatactcatgttgttgctggagcattgctaggtattggaattgtcacatgcggcgtgaag
aatgattgtgatcctgcgcttgcaattctcatggagtatattggaaaggatgactcaaac
attcgtattggtgcaatattgggtcttggaattgcatatgctggttcccagaaagaagag
cttaaaacgcatctttctgctgtgttgggagactcccaatcacctcttgaggtcttggtc
ttctcagccattgccttgggattggtgtttgtcggttcttgcaatgaagagattgcgcag
tctatcatattcgccttgatggagcgtagtgaagctgagttagcagagcccattataagg
ttgcttcccgttgcacttggccttctatatcttggaaaacaggaaagtgtagaggctact
gcggaggtctctaaaacatttgatgagaagatagggaagtactgtgatgtaacgcttatg
tcattggcatatgccgggacagggaatgtgcttaaggttcagaaacttcttgggatttgc
tcacagcatcttgagaaaggcgaaacacaccaagggccagcggtccttggaattgctctc
attgctatggctgaagaattaggagctgaaatggctgtgcgctcacttgagcgtcttttg
cagtatggcgagcagaatattagacgggcagttcctcttgctcttggtatactctgtata
tctaatcccaaggtaaatgtgatggacacactgagcagattgagtcatgacgcagatgct
gatgtgtcaatggctgcaatcatctcattgggtttgattggtgctgggacgaacaatgcc
agaatagctggcatgcttcgcaacctttcaagttattactacaaagaagctgctcacctg
ttttgtgtaagaattgctcagggtcttgttcaccttggaaagggtttgttgaccctttct
ccataccattctgatcgttttcttctttccccgatggcgcttggtgggcttgtcactgtt
ttgcatgcctgccttgatatgaagtctactatcctagggaaatatcactacatcctttac
attattgtcctggcaatgcagccgaggatgcttttgacggtggatgaggatctgaagccc
ctctctgttccagtccgggttgggcaagctgttgatgttgttggtcaggcaggaaggccc
aaaacaattacaggctttcagacacattccacacctgtcttgcttgcagctggggagcgt
gctgaactagcaactgaaaaatacattccactgacaccggtactcgagggctttgtaatt
ctcaagaaaaacccagaatatcacgaggagtga
DBGET
integrated database retrieval system
