Panicum virgatum (switchgrass): 120649062
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Entry
120649062 CDS
T07260
Name
(RefSeq) non-specific phospholipase C4-like
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00562
Inositol phosphate metabolism
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120649062
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120649062
00565 Ether lipid metabolism
120649062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pvir02042
]
120649062
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
120649062
Bacterial toxins [BR:
pvir02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
120649062
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Gene cluster
GFIT
Motif
Pfam:
Phosphoesterase
Motif
Other DBs
NCBI-GeneID:
120649062
NCBI-ProteinID:
XP_039781673
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Position
9K:complement(681016..683215)
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AA seq
518 aa
AA seq
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MAGKIKTVVVLVQENRSFDHMLGWIKSLNPDIDGVTGDETNRVDASDPSSRAVRFSDRAQ
YVDPDPGHSIQAIYEQLYGTPFVDAAATPITPTGVPAPPMSGFAQQAEKEKPGMADTVMS
GFRPDAVPVYRELVREFAVCDRWFASVPASTQPNRLFVHSATSRGLVSNDASILVAGLPQ
RTIFDNLHDQGFSFGIYYQYPPSTLFYRNLRRLKYAGCFHQFDLHFRRHCREGKLPNYVV
VEQRYFDLKLLPGNDDHPSHDVAEGQRFVKDVYEALRSGPQWEEALLVITYDEHGGFYDH
VPTPVGVPSPDGIASAAPFFFHFDRLGVRVPALFVSPWIEPGTVLHRPSGPYPTSEFEHS
SIPATVKNIFSLDGFLTKRDAWAGTFDSVLTRDTPRADCPVTLPEPVKLRHTAAAEHAPL
SEFQEELVQLAAVLNGDHTKDSYPHKLVEGMTVPEAAKYCVDAFRAFLDECDRCSKCGED
GCHIPTVKPSSAAPGKNKSSFASMVLACLACAHPSSSS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagatcaagactgtggtggtgctggtgcaggagaaccgctccttcgaccac
atgctgggctggatcaagtcgctgaacccggacattgacggcgtcaccggcgacgagacc
aaccgcgtggacgcctccgacccctcctcccgcgccgtccgcttcagcgaccgcgcccag
tacgtggacccggacccgggccactccatccaggccatctacgagcagctctacgggacg
cccttcgtcgacgccgccgccacgcccatcacgccgaccggcgtccccgcgccgcccatg
tccggcttcgcgcagcaggcggagaaggagaagcccggcatggcggacacggtcatgagt
ggcttccgccccgacgccgtgcccgtctaccgggagctggtgcgggagttcgccgtgtgc
gaccgctggttcgcctccgtgccggcgtccacgcagcccaaccggctgttcgtgcactcg
gccacctcccgcggcctcgtcagcaacgacgccagcatcctcgtcgccggcctgccgcag
aggacaatcttcgacaaccttcatgaccagggcttctccttcggcatctactaccagtac
ccgccctccacgctcttctacaggaacctgcgccggctcaagtacgccggctgcttccac
cagttcgacctccacttcaggcgccattgccgggagggcaagctgcccaactacgtcgtc
gtcgagcagcgctacttcgacctcaagctcctccccggcaacgacgaccacccctcccac
gacgtcgccgagggccagcgcttcgtcaaggacgtctacgaggcgctgcgctccggcccg
cagtgggaggaggcgctgctcgtcatcacctacgacgagcacggcggcttctacgaccac
gtccccacccccgtcggcgtgcccagccccgacggcatcgccagcgccgcgcccttcttc
ttccacttcgaccgcctcggcgtccgcgtcccggcgctcttcgtctcgccgtggatcgag
ccggggaccgtcctgcaccggccctcgggaccctacccgacgtccgagttcgagcactcc
tccatcccggccaccgtcaagaacatcttcagcctcgacggcttcctcaccaagcgcgac
gcctgggccggcaccttcgactccgtgctcacgcgcgacacgccgcgcgccgactgccca
gtcaccctgcctgagcccgtgaagctgcggcacacggcggcggcggaacatgccccgctg
tcggagttccaggaggagctcgtccagctcgccgcggtgctcaacggcgaccacaccaag
gactcctacccgcacaagctcgtcgagggcatgacggtgccggaggcggccaagtactgc
gtcgacgccttcagggccttcttggacgagtgcgaccgctgcagcaagtgcggcgaggac
ggctgccacatccccaccgtgaagccgtcgtctgctgcgccgggcaagaacaagagcagc
ttcgcgtccatggtgctggcttgccttgcgtgtgcccatccatcttcctcttcctag
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