KEGG   Panicum virgatum (switchgrass): 120649079
Entry
120649079         CDS       T07260                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'-like
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120649079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120649079
Spliceosome [BR:pvir03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120649079
 Complex B
    120649079
 Complex C
   U2 SnRNP specific factors
    120649079
SSDB
Motif
Pfam: LRR_9 LRR_4 LRR_8 DHU1_N LRR_R13L1-DRL21 LRR_14 LRR_NXF1-5
Other DBs
NCBI-GeneID: 120649079
NCBI-ProteinID: XP_039781696
LinkDB
Position
9K:complement(763773..767621)
AA seq 283 aa
MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF
PYLNRLGTLLVNNSRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQYLSL
LDNTVTKQPDYRLYVIHKLKHLRLLDFKKVKQQERVAAAQKFHSKEAEEEAKKVPVKTST
PGQLDAQDTTNEVQAPKVVAPTPEQITAIKAAIVNTHTLEEAARLEKALSTGQVPAEFAM
PKPDANMAEASEEAEKMDTDGQNQESEADGQKQDDESTPIQED
NT seq 852 nt   +upstreamnt  +downstreamnt
atggtcaggctcaccgccgacctgatatggaagagcccgcacttcttcaacgccatcaag
gagcgcgagctcgacctccgaggcaacaagatcgccgtcatcgagaacctcggagccact
gaggaccaatttgacacaattgacttgtcggacaatgagattgtcaagcttgaaaacttc
ccatacttgaatcgtcttggcactctactagttaacaatagcagaatcacgcgtatcaat
cccaatcttggtgagtttttgccaaagctgcatactcttgtgctcacaaacaaccgtctg
acaaaccttgcggagattgatcccctggcatctcttccaaagctacaatatctcagttta
ctggataatactgtaaccaagcagccagactacaggttatatgtcatccataaattgaag
catttgcgtttgctggatttcaagaaagtgaaacagcaggagagagttgcagcagcgcaa
aagtttcactcgaaggaggcggaggaagaggcaaagaaggtacctgttaaaacatctact
cctggacagctggatgctcaagacaccacaaatgaggtgcaggctcctaaagtagttgct
ccaactcctgaacaaatcacagctatcaaggctgctattgtgaatacccacactcttgag
gaggctgcaaggctagagaaggcattgagcactggtcaagtgcctgctgaatttgcaatg
cccaaacctgatgcaaacatggctgaagcttcagaggaagctgagaagatggatacagat
ggccagaaccaagagagcgaggctgatgggcagaagcaagatgacgagagcaccccaatt
caagaggattga

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