Panicum virgatum (switchgrass): 120649120
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Entry
120649120 CDS
T07260
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00071
Fatty acid degradation
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120649120
00071 Fatty acid degradation
120649120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120649120
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120649120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120649120
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120649120
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120649120
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120649120
Exosomal proteins of breast cancer cells
120649120
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Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120649120
NCBI-ProteinID:
XP_039781749
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All DBs
Position
9K:1051174..1069945
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AA seq
731 aa
AA seq
DB search
MLAASSGQMAGLCFPRRSPSPLLSPRRLLPRRPAARPRGGLPRWRCSSTASPPPPSADSA
LEHPLRRKCSPLLESVLLPGGSDLNVHEWKAVPDIWRTAAEKYPDLIAVIDPYHEPPTEW
TYTQLEQEILDFSQGLRAIGVAPDEKLALFADNSCRWLVADQGIMATGAINVVRGTRSSN
EELFQIYTHSESIALVVDSPQFFNRLAESFISRINARFIVLLWGDKSCIDSKVVKDIPLY
DYKDMTKLGWESRNALLLSGHQGQKEVFETITPEDVATLIYTSGTSGTPKGVMLTHRNLL
HQIKNLWDIVPAEPGDRFLSMLPPWHAYERACEYFIFTYGIQQVYTTVKYLKEDLQRYQP
HYIISVPLVFETLYSSIHRQISSTSAARKIIALSLIKISLLYMEAKRIYEGTVLSNNPVQ
PSFIVYMVKWIWARFIATFLWPLHNLAKILVYKKIHSAIGISKAGISGGGSLPMHVDKFF
EAIGIKVQNGYGLTETSPVVAARRPFCNVLGTVGPPVKHTDIKVFDIETGDVLPYGSKGI
VKIKGPQVMKGYYKNPSTTNEALDQEGWFNTGDIGWIAPRHAIGPSRKCGGMLVLEGRAK
DTIVLSTGENVEPAEIEEAASRSNLINQIVVIGQDQRRLGAIVVPNNDEVLAEAKRKSLI
DENGEVAKDEVMNMLYDELRTWTAQCSFRIGPIMIVDEPFTIDNGLMTPTMKIRRDKVTA
KYQTEIEALFK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctgcctcgtccggccaaatggccgggctctgcttcccgcgccgctctccgtcc
ccgctcctcagcccccgccgcctcctccctcggcgccccgccgcgaggccgcgcggcggc
ctgccccggtggcggtgctcgtccaccgcctctccgccgcccccgtccgccgactccgcg
cttgaacatccacttcgtagaaagtgctctcctttactcgagagtgttctattacctggc
ggaagtgacttgaacgtgcatgaatggaaggcagttccagatatctggaggacagcagca
gagaaatatcctgacctcatagctgtaatagatccttaccatgaaccgccgacagaatgg
acatatacacagcttgaacaagaaatattggatttttctcaaggtctaagggctattggc
gttgctccagatgaaaagctagctctatttgctgacaactcatgccggtggttagttgca
gatcaaggaataatggctactggtgcaatcaatgttgttagaggaacaagatcttccaat
gaagaattgtttcaaatatacactcattcagaaagcattgcacttgttgtggacagtcct
caattctttaaccggcttgcagaatctttcatatcaaggattaatgcaagattcattgtg
ctactttggggagacaaatcatgcatagatagcaaagttgtgaaggacataccactttat
gactacaaggatatgactaaacttggctgggagagtcgtaatgctctgcttctttctggc
caccaaggtcagaaagaagtcttcgaaactattactccagaagatgtggcaacacttata
tatactagtggaacaagtggcacaccgaaaggtgtaatgctgacccatcgaaatctcttg
catcagataaagaatttgtgggacattgtaccagcagaacctggtgataggttcctaagc
atgcttccaccatggcatgcttatgagcgtgcttgtgagtacttcatcttcacttacgga
atccagcaagtttacactaccgtcaagtacctgaaggaagatttgcagcgctaccaacct
cactatattatatcggtaccgctagtctttgaaactttgtacagttccattcataggcag
atttcttccacttcagctgctcgaaaaatcattgctctttcacttatcaagataagctta
ctatatatggaggccaagaggatttatgagggaacagttttatcaaacaatcctgttcaa
ccatcgttcattgtctatatggtcaagtggatatgggcaagatttattgccacatttttg
tggcctttgcataatctggcaaaaatactagtctacaagaaaattcattcagcaatcggg
atttcaaaggctggtattagtggtggtggaagtcttccgatgcatgtcgataagtttttt
gaggccattggcattaaagtacaaaacggctatggcctaaccgagacttctcctgttgta
gctgctagaagaccattctgcaatgttctcggcacggttggccccccagtaaaacacact
gatatcaaggtttttgacatagagactggtgatgtgcttccatatggttcaaaggggatt
gtgaaaattaaaggaccacaagtcatgaagggatactataagaacccatctactacgaat
gaagctctggatcaagagggttggttcaacactggagatataggttggattgcacctcgc
catgccatagggccgagtcggaagtgtggagggatgcttgttctcgaagggcgtgcaaag
gatacaatagttctctctacaggtgaaaatgttgaacctgctgagattgaggaagcagct
agcaggagtaacttgattaatcagatagttgtgatcggccaggatcaacggcgtcttggt
gccatagttgttcccaataatgatgaagttctggcagaagcaaaaaggaagtccctaatt
gatgagaatggcgaagtagcgaaagatgaggtcatgaacatgctatatgatgagctgaga
acctggaccgcacagtgctctttccgcatcggccctatcatgattgtcgatgaaccattt
acaattgacaacggactgatgacacccaccatgaaaataagacgggacaaagtgaccgca
aaataccaaacagagatcgaagcgttgttcaagtga
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