Panicum virgatum (switchgrass): 120649149
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Entry
120649149 CDS
T07260
Name
(RefSeq) phospholipase D delta-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120649149
00565 Ether lipid metabolism
120649149
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120649149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120649149
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120649149
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120649149
Endosome - Golgi transport
Others
Others
120649149
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
PBP_N
Motif
Other DBs
NCBI-GeneID:
120649149
NCBI-ProteinID:
XP_039781793
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All DBs
Position
9K:1278751..1283846
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AA seq
853 aa
AA seq
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MGNGLAEPEAAVLLHGDLDISIVEARCLPNMDLMSERMRRCFSACGGGGGAGSCGGDRSA
PPDRLRRGGSMSAKKKIVNSDPYVSVCLAGATVAQTRVIPNSDNPRWEEHFRVDVAHAAA
RVEFHVKDNDVFGAQLIGVASVPVEKIATGALVSGWFPIQGRCSSSSPRPTPELQLSLRY
QPIEDNPLYKNGVGAGPQYSGVPNAYFPLRRGGHVTLYQDAHVVDGNLPKIEIDGGSFYE
HGKCWEDICHAIIQAHHLVYIVGWSIYHPVKLVREPTKPMPGGTPPTLGELLKGKVHEGV
RVVVLLWDDKTSHDKFLLKTDGVMHTHDEETRKFFRHSGVYCVLVPRYASNKLSIFKQQV
VGTLFTHHQKCVILDSQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFKDLDTVFKKDFHN
PTFPANSHGPRQPWHDLHCKVEGPAAYDILTNFEQRWRKATKWKVNLKKVASWQYDTLIK
LNQMSWIVSPATDEANAHVCDEQDPENWHIQVFRSIDSGSVKGFPKLVQEAESQNLVCAK
NLMIDKSIHSAYVKAIRSAQRFIYIENQYFIGSSFCWPSCKNAGADNLIPIELALKIAGK
IKAKERFAVYIVIPMWPEGIPTTAPMQQILFWQGQTMSMMYKIVADALQSQGLLDAHPQD
YLNFYCLGRRELADGDISSPKTLCNDNSPLHVAQKFRRFMIYVHSKGMIVDDEFVIIGSA
NINQRSMEGSRDTEIAMGAYQPHYKWAGNTGPPRGQVYGYRMSLWVEHLGTVEVCFRRPE
TEECVRRVNEMAEENWQKYVSPDMEETRAHLLRYPVQVGKDGQVGPLPGHECFPDVGGKV
LGTQSSLPNALTT
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacggcttggcggagcccgaagccgccgtgctgctgcacggcgatctggacatc
agcatcgtggaggccagatgcctccccaatatggacctcatgtcggagcggatgcgccgg
tgcttcagcgcctgcggcggcggcggcggcgcggggtcctgcggcggggaccgctccgct
cctcccgacagacttcgccggggcggcagcatgtcggccaagaagaagatcgtcaacagc
gacccctacgtctccgtctgcctcgccggcgccacggtcgcgcagacccgcgtgatcccc
aactccgacaacccccggtgggaggagcacttccgcgtcgacgtcgcgcacgcggccgcc
cgtgtcgagttccacgtcaaggacaacgacgtcttcggggcgcagctcatcggcgtcgcc
tccgtgcccgtcgagaagatcgccaccggggcgctcgtcagcggctggttccccatccag
ggccgctgcagcagcagctctccgagaccgacgccggagctgcagctctcacttcggtac
cagccgattgaggacaacccattgtacaagaatggggtgggcgccggtcctcagtactcc
ggtgtgccgaacgcctacttccctctccggcgaggaggccatgtcactctctatcaggat
gctcatgtcgttgatggcaatctgcctaagattgagatagatggtggtagtttctatgag
catggaaaatgttgggaggacatttgccacgccattatccaagcacatcatcttgtttat
attgttggctggtccatttatcaccctgtcaagcttgtgagggagcctaccaagccaatg
cctggtggaacaccgccaaccctcggggagctcctcaagggaaaggttcatgagggagtc
cgcgtcgtggtgttgctttgggatgacaagacgtcacatgacaaattccttttgaaaaca
gatggtgtcatgcatacacatgatgaggaaactagaaagtttttcaggcattcaggagta
tattgtgtactggttcctcgttatgccagcaacaaacttagcattttcaagcagcaggtt
gttggaactttatttacacatcatcagaaatgtgtaattcttgattcacaagctgctgga
aacaatcgcaaaataactgctttcattggtggtcttgacttgtgtgatggcagatatgat
acacctgaacataggcttttcaaagaccttgatactgttttcaagaaggactttcataac
cctacatttccagctaattcccatgggccaagacaaccttggcatgatttacattgcaaa
gttgagggtcctgctgcctatgatatactgacaaactttgaacagcgatggaggaaagct
acaaaatggaaagttaaccttaagaaagttgcaagttggcagtatgatacactgataaaa
ctaaaccagatgtcatggattgtttcaccagctacagatgaagcgaatgcgcatgtttgt
gatgaacaggacccagaaaactggcatatacaggttttcaggtcaattgattcaggatcc
gtaaagggatttccgaagcttgttcaggaggcagagtcacagaatcttgtttgtgcaaag
aatttaatgattgacaagagtatacatagtgcttatgtgaaagccatcaggtctgcacag
cggtttatatacattgagaaccagtatttcatcgggtcttcattctgctggccttcatgt
aaaaatgcaggtgcggataatttaatacccattgagctggccttgaagattgcaggcaag
atcaaggcaaaggagcgatttgcagtgtacattgtcataccaatgtggcctgaaggaatc
ccaaccaccgctcctatgcagcaaatcctcttttggcaggggcaaaccatgtctatgatg
tacaagattgtggcggatgctcttcagagccagggtctccttgacgcccatccacaagat
tacctgaatttttactgcctcggcagacgtgagctcgccgatggtgacatctcatctcca
aagaccttatgcaatgacaactctcctctgcatgtggcccagaaattccggaggttcatg
atctacgtgcactcgaaagggatgatcgtcgacgacgagttcgtcatcatcggatcagcc
aacataaaccagaggtccatggaaggctccagggacaccgagatcgcgatgggcgcgtac
caaccgcactacaagtgggctggaaacacaggccctcctcgcgggcaggtgtacgggtac
aggatgtcgctatgggtggagcacctgggcacggtggaggtgtgcttccggcggccggag
acggaggagtgcgtccggcgggtgaacgagatggcagaagagaactggcagaagtacgtg
tcgccggacatggaggagacgagggcccacctgctgaggtacccggtccaggtgggcaag
gacgggcaggttgggccgctgccggggcacgagtgcttcccggacgtcggcggcaaggtc
ctcggcacgcagtcgtcgctgcccaatgccctgaccacgtaa
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