Panicum virgatum (switchgrass): 120649157
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Entry
120649157 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 54-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120649157
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120649157
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120649157
NCBI-ProteinID:
XP_039781799
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Position
9K:complement(1373507..1378393)
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AA seq
576 aa
AA seq
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MAKQPSTRDEEGQPAGNHCGDGGEATIYIPREGGKATSQAQQKQNRRLCCLLHTERTSSG
DCTRCRWVGMAIPLQGKDGNGGGGGGGGGQVGGDDQPSVAAELRALWGMAAPITALNCVV
YLRALVSVLCLGRLGPLDLAGGALAIGLTNITGHSVLFGLASGLEPLCAQAFGSRNHELL
TLSLQRAMLLLFLAALPIALLWLNVGPILVALGQDPAISAPAAAYARFALPDLAASVVLQ
PLRVYLRSQGITRPMAACSAIAVALHVPLNVLLVFGLGFGVRGVAAAQALTNTNMLLFLL
AYIRWARACGDTWRGWARPAVVASGLPGLARLAVPSCVGVCLEWWWYEVVTVLAGYLPNP
AAAVGAAGVLIQTTSLMYTVPMALAACVSTRVGNELGAGKPRRARMAAMVALWCALAIGA
VHVAWTSALSRQWAELFTTERPVVRLAAAAMPILGLCELGNCPQTTGCGVLRGTARPAVG
ARINLLSFYLVGTPVAVYLAFGARAGFSGLWYGLLSAQATCVALVLAAVVWRTDWQVEAI
RAKKLAGLELTATTPAAAAEESIRLVAANGEPAEDV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagccgagtaccagagatgaggagggacagcccgcaggcaatcactgcggc
gacggcggcgaggcgaccatatatatccccagggagggaggcaaggcaaccagccaggcg
cagcagaaacaaaaccgccgcctctgctgcctcttacacacagagcgcactagcagtggt
gactgcacccgttgccgttgggtcggcatggccatcccgctccaggggaaggacggcaat
ggcggcggcggcggcggcggcggcggccaggtggggggcgacgaccagccgtcggtggcg
gcggagctccgcgcgctgtggggcatggcggcgccgatcacggcgctcaactgcgtggtg
tacctgcgggcgctggtgtccgtgctctgcctcggccgcctgggccctctggacctcgcc
ggcggcgcgctcgccatcgggctcaccaacatcacgggccacagcgtgctgttcggcctc
gcgtcggggctcgagccgctctgcgcgcaggccttcggctcccgcaaccacgagctcctc
accctctccctccagcgcgccatgctgctgctcttcctcgccgcgctccccatcgcgcta
ctctggctcaacgtcggccccatcctcgtcgcgctcggccaggaccccgccatctccgcc
cccgccgccgcctacgcgcgcttcgcgctcccggacctcgccgccagcgtcgtgctccag
ccgctccgggtgtacctccgctcccaggggatcaccaggcccatggcggcatgctccgcg
atcgccgtcgcgctccacgtcccgctcaacgtgctcctcgtcttcggcctcggcttcggc
gtccgcggcgtcgccgccgcgcaggcgctcaccaacaccaacatgctgctcttcctgctc
gcctacatccgctgggcgcgcgcgtgcggcgacacgtggagagggtgggcgcgccccgcc
gtggtcgccagcggcctgccggggctcgccaggctcgccgtgcccagctgcgtcggcgtc
tgcctcgagtggtggtggtacgaggtcgtcaccgtgctcgccggctacctgcccaacccc
gccgccgccgtcggcgccgcgggggtgctcatccagaccaccagcctcatgtacaccgtg
cccatggcgctcgcggcctgcgtatccaccagggtgggcaacgagctgggcgccggcaag
ccccggcgcgcgcggatggcggcgatggtggcgctgtggtgcgcgctggcgatcggcgcg
gtccacgtggcgtggacctcggcgctgagccggcagtgggcggagctgttcacgacggag
cggccggtggtgcggctggcggcggcggcgatgcccattctggggctgtgcgagctgggc
aactgcccgcagaccacgggttgcggcgtgctccgcggcacggcgcgcccggccgtgggc
gcccgcatcaacctcctctccttctacctcgtcggcacccccgtggccgtgtacctggcg
ttcggcgcccgcgccgggttcagcggcctctggtacggcctcctctcggcacaggccacc
tgcgtggcgctcgtgctcgccgccgtcgtgtggcgcaccgactggcaggtcgaggcgatc
cgcgccaagaagctggcgggcctggagctcacggccacgacgcccgccgccgccgccgag
gagagcattcgcctcgtcgccgccaacggtgagccggcggaggacgtctag
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