Panicum virgatum (switchgrass): 120649203
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Entry
120649203 CDS
T07260
Name
(RefSeq) calreticulin-like
KO
K08057
calreticulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120649203
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120649203
04148 Efferocytosis
120649203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120649203
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120649203
Chaperones and folding catalysts [BR:
pvir03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120649203
Lectins [BR:
pvir04091
]
L-type lectins
120649203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
120649203
NCBI-ProteinID:
XP_039781863
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All DBs
Position
9K:complement(1791757..1795530)
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AA seq
445 aa
AA seq
DB search
MAVLERSSSPTAAAVAALIALASVAVVAGEVYFQEKFDDGWVDRWVKSDWKKDDSTAGEW
NHTSGKWNGDADDKGIQTSEDYRFYAISAQYPEFSNKDKTLVLQFSVKHEQKLDCGGGYV
KLLGGYVDQKKFGGDTPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKEVPCETDQLTH
VYTLIIRPDATYSILIDNAEKQSGSIYDDWDILPPKKIKDPEAKKPEDWDDKEYIPDPED
KKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPDYKGKW
KAPLIDNPDYKDDPYIYAFDSLKHIGIELWQVKSGTLFDNILITDDPEYAKKFAEETWAK
LKDAEKAAFDEAEKKRLEEESASTNDDNDADEDEDDTDDEKADTAAEEAKDSVDAKSEDG
KVAADEKPEEGSKDASAEEKKHDEL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcctcgagaggtcgtcgtcccccaccgcggccgccgtcgcggccctgatcgcg
ctcgcatcggtcgccgtcgtcgccggcgaggtctacttccaggagaagttcgacgacggg
tgggtggaccggtgggtcaagtccgactggaagaaggacgacagcacggccggcgagtgg
aatcacacgtctggcaaatggaatggagatgccgacgacaaaggtatccagacctctgaa
gactacaggttctacgccatttcagcacagtaccccgagttcagcaacaaggacaagaca
ctggtgctgcagttctcggtgaagcacgagcagaagctcgactgcggtggtggctatgtg
aaattgcttggtggatatgtcgatcagaagaaatttggtggggacacgccatacagcatc
atgtttggaccggatatctgtgggtatgccaccaagaaggttcatgctatccttactaag
aacggcaagaaccatttgatcaagaaggaggtgccatgtgagaccgatcagctgacacat
gtgtatactttgataatccgtcctgatgccacatacagcattctcattgacaacgctgag
aagcaatctggcagcatctatgatgattgggatattcttcctccaaagaagatcaaagat
cctgaagccaagaagccagaagattgggatgacaaagaatacattccagatcctgaggac
aagaagccagagggttatgatgatattcccaaggaaattcctgaccctgatgcaaagaag
ccagaggattgggatgatgaagaagatggtgaatggacagccccaaccattcctaaccct
gagtacaaaggaccatggaagcaaaagaaaatcaagaaccccgactacaagggcaagtgg
aaggctcccttgattgacaacccagattacaaggacgacccttacatctatgcttttgac
agtttgaagcacattggcattgaactgtggcaggttaaatcaggaactctgttcgacaac
attctgatcactgatgaccctgagtacgccaagaagtttgcagaggagacctgggccaag
ctgaaagatgctgagaaggctgcctttgacgaggccgagaaaaagaggctcgaggaggaa
tctgcgagcactaatgatgacaatgatgcagatgaggatgaggatgacacggacgatgaa
aaggctgatacagccgcagaggaggccaaggactctgttgatgcgaaatcggaggatggc
aaggtcgctgctgatgagaagccagaggagggcagcaaggatgcttccgctgaggagaag
aaacatgacgagctctag
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