Panicum virgatum (switchgrass): 120649219
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Entry
120649219 CDS
T07260
Name
(RefSeq) mannan endo-1,4-beta-mannosidase 3-like
KO
K19355
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00051
Fructose and mannose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
120649219
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
120649219
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Gene cluster
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Motif
Pfam:
Cellulase
Glyco_hydro_42
Glyco_hydro_cc
Motif
Other DBs
NCBI-GeneID:
120649219
NCBI-ProteinID:
XP_039781886
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Position
9K:1924234..1926286
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AA seq
463 aa
AA seq
DB search
MARPRPEALAASFLLLFLAASAGAAGLELVRVDGTQFVVGGKTVYFSGFNAYWLMLVASD
PARRGQVVAAFRQAAGHGLNLARTWAFSDGGDAPLQAAPGVYDEAMFQGLDFVIAEAGRH
GIYLLLCLTNNFHDFGGKRQYVAWAREAGHHLATADDFFNTTVVKGYYKNHVKTVLTRVN
TVTGVAYRDDPTILGWELMNEPRCDADPTGAMVQAWVEEMAPYVKSIDGDHLVTAGLEGF
YGDGTHERKDLNPWGIYYGTNFVDTHRAAGVDFATIHLYPDLWLWGAAAAEQLAFLRNWT
RSHARDAELYLAKPLLVTEYGKFLWDGVANRTQRDRFLGLVLDSIYASAASGGPLVGGAF
WQLLDPGMDTLRDGYEIILPEDQRAATIIGNHSRQLAELNGQDVEAVRRRRRQRRRRNVH
VGSSSGRSRSRSSSDTPRLHMLLVRFISLFRSITSLFSSASSV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccacggccggaggccctcgcggccagcttcctgctcctgttcctggccgcc
tccgccggcgccgccgggctggagctggtgcgcgtggacgggacgcagttcgtggtgggc
ggcaagaccgtctacttcagcgggttcaacgcgtactggctgatgctggtggcgtcggac
ccggcgcggaggggccaggtggtggccgcgttccggcaggcggcggggcacgggctcaac
ctcgcgcggacctgggccttcagcgacggcggcgacgccccgctgcaggcggcgcccggc
gtctacgacgaggccatgttccaggggctggacttcgtgatcgccgaagccgggcggcac
ggcatctacctcctcctctgcctcaccaacaacttccacgacttcggcggcaagcgccag
tacgtggcctgggccagggaggccggccaccacctcgccaccgccgacgacttcttcaac
accaccgtcgtcaagggatactataagaaccacgtcaagacggtgctgacgcgggtgaac
acggtgaccggggtggcgtacagggacgaccctaccatcctcggctgggagctcatgaac
gagccgcgatgcgacgccgaccccaccggcgccatggtgcaggcctgggtggaggagatg
gcgccgtacgtcaagtccatcgacggcgaccacctggtgacggcggggctggagggcttc
tacggcgatggcacgcacgagaggaaggacctcaacccctggggcatctactacggcacc
aacttcgtcgacacccaccgcgccgccggcgtcgacttcgccaccatccacctctacccg
gacctctggctctggggcgccgccgccgccgagcagctcgccttcctccgcaactggacg
cgctcgcacgccagggacgccgagctctacctcgccaagccgctgctcgtcaccgagtac
ggcaagttcctctgggacggcgtcgccaaccgcacgcagcgggaccgcttcctgggcctc
gtgctcgactccatctacgcctcggccgcctccggcgggccgctcgtcggcggcgccttc
tggcagctgctcgaccccggcatggacacgctcagggacggctacgagatcatactcccc
gaggaccaacgcgccgccaccatcatcggcaaccactcccgccagctggccgagctcaac
ggccaggacgtcgaggcggttcgccgccggaggagacagcggcggcgcaggaacgtgcac
gtcggcagcagctcgggtaggagtaggagtaggagtagcagtgacacaccacggttacac
atgctcttggttcgtttcatctctttgttcagatcaatcacttcgctgttcagttcagca
agcagcgtatag
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