Panicum virgatum (switchgrass): 120649243
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Entry
120649243 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML21
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120649243
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Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
AIF-1
EF-hand_14
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
120649243
NCBI-ProteinID:
XP_039781928
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Position
1K:8394138..8398427
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AA seq
227 aa
AA seq
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MGGVIGGESPRNSSPASKLERKMVEAMQQRALKGTSVKSFNSVIMKFPKIDESLRNCRTI
FQQFDEDSNGEIDQQELKHCFQKLGIESTDDEIKDLFQACDIYEHMGMKFNEFIVFLCLV
YLLNDPAVSEARKRMGLGCLEPTFETLVESFVFLDKNKDGYVSKNEMIQAINETSAGERS
SGRIGVKRFEEMDWDKNGTVTFKEFLFAFTRWVGIDNEDEDDDDEDE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgtaatcggtggtgagtcgccaaggaacagttccccggcatcaaagttagag
aggaagatggttgaggcaatgcagcagagggcattgaaaggaacttctgtgaaatcgttc
aacagtgtcatcatgaaattccctaaaattgacgagagcttgagaaactgcaggaccatc
tttcagcaatttgatgaagattccaatggtgaaatagatcaacaggaactcaagcactgt
ttccagaaattgggtatcgaatctactgatgatgaaataaaagatctgtttcaggcatgc
gacatttatgaacacatgggcatgaagttcaatgaatttattgtcttcctgtgccttgtt
tatcttctcaatgatcctgcggtgtctgaagcaagaaaaagaatgggattaggctgtctt
gagccaacattcgagacattggttgagtcatttgtcttcttggacaagaacaaagatggt
tacgtcagtaagaacgagatgatacaagcaataaacgagaccagtgcaggagaacgctcc
tctgggcgcataggcgtgaaaagatttgaggaaatggattgggacaagaatggcacagtg
accttcaaggagttcctcttcgcttttactcgctgggtggggatcgacaatgaggacgaa
gatgacgacgacgaagatgaatga
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