Panicum virgatum (switchgrass): 120649293
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Entry
120649293 CDS
T07260
Name
(RefSeq) PHD finger protein ALFIN-LIKE 3-like
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120649293
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120649293
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Motif
Pfam:
Alfin
PHD
C1_1
Zn_Ribbon_TF
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
120649293
NCBI-ProteinID:
XP_039781987
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Position
9K:2587494..2591211
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AA seq
250 aa
AA seq
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MDMAPASVSSNPRSVEEIYKDFSGRRAGLVGALTSDVDDFYSSCDPDKENLCLYGLPNGT
WAVAPPAEEVPPEMPEPALGINFARDGMQRRDWLSLVAVHSDSWLISVAFFFGARLNAND
RKRLFSMVSDLPSVFEAFSDRKHGRDRSGVDSSGKSRHSSKRGSDGHVKNSRTAAPAAKQ
CDDDDDEDDEEHTETFCGTCGGLYNSNEFWIGCDICERWFHGKCVRITPARADHIKHYKC
PDCSSKKMRQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcccccgcgtccgtctcgtccaacccgcgctcggtcgaggaaatctacaag
gacttctccggccgccgcgcaggcctcgtcggcgccctcacctccgatgtggacgatttc
tacagctcctgcgacccagacaaggagaatttgtgcctgtacggcctccccaacgggacc
tgggcggtggcgccgccagcggaggaggtgccgccggagatgccggagccggcgctgggc
atcaacttcgcgcgggacggcatgcaacgccgggactggctctcactcgtcgcagtccac
tccgactcgtggctcatttccgtcgccttcttcttcggcgcacgcctcaacgccaacgat
cggaagcgcttattcagcatggtcagtgatcttccatccgtctttgaagcattctcagac
aggaaacatggcagagatagatctggtgttgatagcagcggcaagtccagacactcgtca
aagagaggaagcgacggccacgtgaagaattctagaacagcagctccggctgccaaacag
tgtgacgatgatgatgatgaagacgacgaggagcacaccgagaccttttgcgggacctgc
ggtgggctgtacaattcgaacgagttctggatcggctgcgacatctgcgagaggtggttc
catggcaagtgcgtgcggattacccccgctcgagcagaccacataaagcactacaagtgc
ccggactgcagctcgaagaaaatgaggcagtag
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