Panicum virgatum (switchgrass): 120649316
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Entry
120649316 CDS
T07260
Name
(RefSeq) KH domain-containing protein SPIN1-like
KO
K14945
protein quaking
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120649316
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120649316
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
120649316
NCBI-ProteinID:
XP_039782023
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Position
9K:complement(2762205..2766284)
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AA seq
279 aa
AA seq
DB search
MSGLYNQGFSPARNLSPQIRSNPDVDSQYLAELLAEHQKLGPFMQVLPICNKLLSQEIMR
VSSIVHNHGFGDFDRHRFRSPSPMSFPNPRSNLPGNGFSPLSGLQERLGFPQGTSMDWQG
APPSPSSHVVKKILRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIK
DPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEIIEELLKPVDESQDFYK
RQQLRELAMLNSTLREDSPHPGSVSPFSNGGMKRAKTGQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggctctacaaccaggggttctcccctgcgcgaaacctctcccctcagattaga
agcaatccagatgttgatagtcagtacttagccgagttgctcgccgagcaccagaagctg
gggcctttcatgcaggtgttgcctatatgcaacaagttgttgagtcaagagattatgcgg
gtatcaagcattgtccacaaccatggatttggcgatttcgacaggcatcgatttagaagt
cctagtccaatgtcttttccaaaccccagatctaatctccctggcaatgggttcagtcct
ttgagcggattacaagagagattaggttttcctcaaggaaccagtatggactggcaagga
gcaccaccaagtcctagctcacatgttgtaaagaagattcttcgtctggaggtcccagtt
gattcttatccgaatttcaattttgtggggcgcattttaggacctagaggtaattctcta
aagcgggtagaagcatccactggatgtcgtgttttcattagaggaaagggttccatcaaa
gatccagggaaggaggacaaactacgaggaaaaccaggctatgagcacctgagtgatccg
ctgcatatcttgattgaggctgagttccctgctagtataatcgatgcaaggttgagacat
gcacaggagattatagaagaattgctaaaacctgtggatgaatcccaagatttctacaaa
aggcagcagctcagggagctggcaatgttaaattcaaccctgagagaggacagccctcat
cctgggagtgtctctccattcagcaacggtggtatgaaacgcgcaaaaacgggtcagtag
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