Panicum virgatum (switchgrass): 120649327
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Entry
120649327 CDS
T07260
Name
(RefSeq) probable DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120649327
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120649327
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120649327
DNA replication proteins [BR:
pvir03032
]
Prokaryotic type
DNA Topoisomerases
120649327
DNA repair and recombination proteins [BR:
pvir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
120649327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
120649327
NCBI-ProteinID:
XP_039782037
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All DBs
Position
9K:2851471..2868475
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AA seq
932 aa
AA seq
DB search
MALSAALRVPLPRLLFLGPSASVLGAASRRRAAAAPAAALRFLASSSPRSAPFTSRTARP
LRSRRRDRDGDGRAAAAGGGAGGGGEGDGGGVAVKERIVPVELHKEATEAYMAYAMSVLL
GRALPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDTAVYDSLV
RMAQDFSMRYPLVQGHGNFGSIDADPPAAMRYTECRLDSLSEAMLLTDLELNTVDFVPNF
DNSQKEPSLLPARVPSLLLNGSSGIAVGMATNIPPHNLGELVDALSVIIQNPEATLQELL
ECMPGPDFPTGGKILGNQGILEAYKSGRGRIVVRGKTDIETIDEKSKRTAIIIKEIPYQA
NKATLVEKIAELVEEKVLEGISDIRDESDRTGMRVVIELKRSADPAIVLNNLYRHTALQS
SFSCNMVAILDGQPRLMGLKEILQAFLDFRCSVIERRARFKLSQALERKHIVEGIVVGLD
NLDAVIQIIRETTNHAAATEALVKGFGLSEKQAEALLDITLRKLTSLERKKFVDEAKILS
EEISKLNDLLSSKKLIFQLIQQEAADLKNKFSTPRRSLIDESVNSEVDDIDIIPNEEMLL
ILSEKGYVKRMNPNTFNLQHRGTIGKSVGKMRMNDTASDFIVCQTHDHVLYFSDKGIVYS
ARAYKIPESTRTATGTPLVQLLPLSDGERITSIIPVSEFGEDQYLVMLTVNGYIKKVPLN
AFSSIRSSGIISIQLVPGDELKWVRRCGNDDLVALASQKGKVIVNSCDKIRPLGRNTRGA
GAMKLKEGDKMAAMDIIPATADKMPESYSSRVRYRCPPWLLFIAENGIGKRVPLNAFRQS
RFNVVGLVGYKLPEDCRLAAVFVAGLSLGDDGESDEQVVLVSQSGTVNRIKVKDISIQSR
YARGVILMRLEHAGKIQSASLISAAAAEVAED
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggccctctccgccgcgctccgcgtcccgctcccgcgcctccttttcctcggcccctcc
gcctccgtcctcggcgccgcctcccgccgccgcgccgccgcggcccccgcggccgccctc
cggttcctcgcctcctcgtcccccaggtccgcgcccttcacctcgcgcaccgcgcggccc
ctccgctcgcgccgccgcgaccgtgacggcgatgggcgcgcggcggccgccggcgggggt
gcgggcggcggcggggagggcgacggagggggtgtggcggtcaaggagcggattgtgccc
gtggagctgcacaaggaggccacggaggcatacatggcgtacgccatgtccgtgctgctc
ggccgcgcgctccccgacgtccgcgatgggctcaagccggtgcaccgcaggatactctat
gccatgcatgagatgggtcttgcgtctcgtagaccattcagaaaatgtgccagagttgtt
ggtgaggtactaggtaagtttcatccacatggagatacagctgtgtatgatagcttggtg
aggatggctcaggatttttcgatgaggtatccgcttgtacaaggacatggaaattttggc
tcgatagatgcagatcctcctgctgcaatgcgatacacggagtgccgcttggattcatta
tcagaggccatgttgttgactgatctggagctgaatacggttgacttcgtaccaaacttt
gataactcacagaaggagccatctctgctgccagctcgtgttccatctctattgttgaat
ggttcttctgggattgcggtgggaatggcaacaaacattcctcctcataatctgggggag
cttgttgatgcactttctgttataattcaaaaccctgaagccacactccaagaactactg
gaatgcatgcctggtcctgacttccctacaggagggaaaatcctaggaaatcaaggtatt
ttggaagcctataaatctggacgcggtagaatcgttgtgagaggaaaaactgacatcgaa
accattgatgaaaaaagcaagcgcacagctataataattaaagagattccataccaagct
aacaaagccactctcgtggaaaagatagctgaacttgttgaagagaaggtattggaaggt
ataagtgatatccgggatgaaagtgaccgcactggaatgcgtgtagtaatcgagctgaaa
agaagtgcagatcctgccattgtcctgaacaacttgtatcgtcatacagctctgcagtct
agctttagctgcaacatggtagctatacttgatggacagccaaggttaatgggattgaaa
gaaattctccaggcgttccttgacttccgatgttctgttatcgaaaggcgtgcaagattt
aagctttcacaagccctagaaagaaaacatattgtggagggcattgttgttggccttgac
aatttggatgctgtgattcaaataatacgagaaactacaaaccatgctgcagcaacagaa
gctttagtcaagggatttggtctatctgagaagcaggctgaagctctgttggacatcaca
ctaaggaagcttacttcccttgagcggaaaaagtttgttgatgaagctaaaattttgtca
gaggaaatttctaagttaaatgaccttttgtcaagcaagaagcttatctttcagcttatt
caacaagaagccgctgatttgaaaaacaagttttctacaccacgacgttctttgatagat
gaatcagttaacagtgaagttgatgatattgacatcattccaaatgaggaaatgcttttg
attcttagtgagaaaggctatgttaagcggatgaaccccaacacattcaatttgcaacat
cgaggaaccataggaaaatctgttggaaagatgcgaatgaatgacactgcatctgatttc
attgtctgccagacacacgaccatgttctttatttcagtgacaagggcatagtatactca
gcacgtgcttataagataccagaatctactagaactgctactggaactcctttggtacag
ctgctacctttgtccgatggagagcgaataacctccatcattcctgtgagtgaatttggt
gaagaccaatatctagtgatgctcaccgttaacggctacatcaagaaagttcctcttaat
gctttttcatcaatcagatcttctgggatcatatcaattcaactggttcctggtgatgag
ctcaaatgggtccgtcgctgtggcaatgatgacctggttgcattggcttcacaaaagggg
aaggttatagtcaactcatgcgataagattcgtcccctgggaaggaatacaaggggtgct
ggtgcgatgaagctaaaagaaggtgataagatggcagccatggatattattccagcaacc
gcggacaaaatgcctgaaagttatagcagcagggtcagatatcggtgtcctccatggctg
ctttttatagctgaaaatggtattgggaaacgggtacccttaaatgcattccggcaatca
agattcaatgttgtaggtttggttggctacaagcttccagaagattgtcgcttagccgct
gtatttgttgctggtctttcactcggtgatgatggggaaagtgacgagcaggttgtttta
gttagccagagtggcactgtaaacagaatcaaggttaaagatatatcgatccagtctcgt
tatgcgaggggagtaattctgatgaggctggagcatgccggaaagatacagtcagcttca
ctgatatctgcggcggcagcagaagtcgctgaagattaa
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