KEGG   Panicum virgatum (switchgrass): 120649331
Entry
120649331         CDS       T07260                                 
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP22-like
  KO
K09567  peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120649331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120649331
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120649331
Enzymes [BR:pvir01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     120649331
Spliceosome [BR:pvir03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    120649331
Chaperones and folding catalysts [BR:pvir03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    120649331
SSDB
Motif
Pfam: Pro_isomerase
Other DBs
NCBI-GeneID: 120649331
NCBI-ProteinID: XP_039782041
LinkDB
Position
9K:2885518..2888720
AA seq 204 aa
MASAGGAAISAGPTPPSATATATAVEWHQRPPNPKNPVVFFDVTIGSIPAGRIKMELFAD
ITPKTAENFRQFCTGEHRKNGLPQGFKGCQFHRVIKDFMIQGGDFLKNDGTGCISIYGTK
FDDENFIAKHTGPGLLSMANSGANSNGSQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRK
IENVATGPNNRPKLACIISECGEM
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcgtccgccggcggagcggccatctccgcggggcccacgccgccgtcggcgacggcg
acggcgacggcggtggagtggcaccagcggccgccgaacccgaagaacccggtggtgttc
ttcgacgtcaccatcgggtccatccccgccggccgcatcaagatggagctcttcgccgac
atcacccccaagaccgccgagaacttccggcagttctgcactggcgagcacagaaaaaat
ggtttgccacagggttttaagggctgtcaattccatagagtgataaaagatttcatgatt
cagggtggtgacttcttgaagaatgatggtactggatgcatatcaatctatggcaccaaa
tttgatgatgagaattttattgcaaagcatacgggacctggactgctctcaatggcaaac
agtggagctaactctaatggatctcagttctttataacatgtgcaaagtgtgactggctg
gacaacaaacatgtggtctttgggagagtgcttggggatggtctacttgttgtgaggaag
attgaaaatgttgccactggaccgaacaaccgaccaaagcttgcctgcattataagcgag
tgcggtgaaatgtaa

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