Panicum virgatum (switchgrass): 120649339
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Entry
120649339 CDS
T07260
Name
(RefSeq) magnesium-chelatase subunit ChlD, chloroplastic-like isoform X1
KO
K03404
magnesium chelatase subunit D [EC:
6.6.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00860
Porphyrin metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
120649339
Enzymes [BR:
pvir01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
120649339
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Gene cluster
GFIT
Motif
Pfam:
AAA_lid_2
VWA_2
Mg_chelatase
VWA
AAA_5
Sigma54_activat
MCM
Dscam_C
AAA_2
PRIMA1
CCDC53
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
120649339
NCBI-ProteinID:
XP_039782050
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Position
9K:complement(2940377..2946528)
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AA seq
783 aa
AA seq
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MATAPALSTSLPHLPPRRVTSFPSAAVSLPSRASRLRESRLAAAAPTASEVLDSTNGAVP
AAAKSAAARGYGREYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGTAKTVMARGL
HAMLPPIEVVVGSIANADPNFPDEWEDGLADRLQYDADGSVKTEIVKTPFVQIPLGVTED
RLIGSVDVEASVRSGTTVFQPGLLAEAHRGVLYVDEINLLDDGISNLLLNVLTEGVNIVE
REGISFRHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDDRVAAVDIATQFQE
SSKEVFKMVEEETEVAKTQIILAREYLKDVNISTEQLKYLVMEAIRGSCQGHRAELYAAR
VAKCLAAMEGREKVFVDDLKKAVELVILPRSILSDNPQDQQQEQPPQPPPPPPPPPENQD
SSEDQNEEEEDDQEVDLLYCTNIKLAAFFHFFSHRSQLFYGQDDEEENEQQDQQIPEEFI
FDAEGGLVDDKLLFFAQQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVRRLAVDATL
RAAAPYQKLRKEKENDKARKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAK
GAALKLLAESYTSRDQVSIIPFRGDYAEVLLPPSRSIAMARKRLEKLPCGGGSPLAHGLS
TAVRVGLNAEKSGDVGRIMIVAITDGRANVSLKRSTDPEAAAASDAPRPSSKELKDEILE
VAGKIYKAGMSLLVIDTENKFVSTGFAKEVARVAQGKYYYLPNASDAVISAATKTALTDL
KGS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcccccgcgctctccacctcactaccgcacctcccgccccgccgcgtcacg
tcattcccctccgccgccgtatccctcccatcccgggcctctcggctacgggagtcccgc
ctcgcggccgcggccccgacagcctccgaggtcctcgactccaccaacggcgccgtcccc
gccgcggcgaagagcgccgcggcgcgcgggtacgggagggagtacttccccttggctgcc
gtcgtcgggcaggatgctatcaaaactgctctgctgcttggggcgattgatcgtgagatt
ggaggcattgccatctcagggaagcgtggaacagcaaagacagtgatggctcgtggattg
catgctatgcttccacccatcgaagtggttgttggctccatagcaaatgctgaccctaac
ttcccagatgaatgggaggatggtttagctgatcgacttcaatatgatgctgatggtagt
gtcaaaaccgagattgtcaaaacaccttttgtgcagatcccacttggtgtgacggaggat
aggctcattggatcagttgatgttgaagcatctgtgagatcagggactaccgtgtttcaa
cctggtcttcttgctgaagctcatagaggtgttctttatgttgacgagataaatctattg
gatgatggcataagcaatctacttctgaatgttttgacggagggagttaacattgtggaa
agagagggcattagctttcgtcatccctgcaaaccacttctaattgctacttacaacccg
gaggaaggatctgtacgtgaacacttacttgatcgtattgcaattaatttaagtgctgat
cttccaatgagttttgatgatcgtgttgcagctgtggatattgcaacacagtttcaggag
tctagcaaagaggttttcaaaatggtggaagaagagactgaagttgcaaaaactcagata
attttggcgagagagtatctgaaggatgttaatattagcacagagcagctcaaatatctt
gtcatggaagctatacgaggtagttgtcaggggcaccgtgctgagttgtatgctgctcga
gtggcaaaatgccttgctgctatggaaggacgcgaaaaagtatttgtggatgacctcaag
aaagctgtagagctagtcattctacctcgctcaatcctatctgataacccacaagatcaa
cagcaagagcaaccaccccaacccccacccccacccccaccccctccagaaaatcaagat
tcttcagaagaccaaaatgaggaggaagaggacgatcaagaggttgatttattgtattgt
acaaatataaaacttgctgccttttttcatttcttttctcatagatcacagcttttttat
ggacaggatgacgaggaagaaaatgaacaacaagatcagcagatacctgaggagttcata
tttgatgctgaaggtggtttagtagatgataagctccttttctttgctcagcaagcgcaa
agacgacgaggaaaagctgggcgagcaaagaatgtcatattctcagaagataggggtcga
tacataaagcctatgcttccaaagggtccagtaaggagattagctgttgatgccacgctt
agagcagctgcaccataccaaaaactgcgcaaagagaaagaaaacgacaaggcaagaaag
gtttttgttgaaaagactgacatgagagccaaaagaatggctcggaaagcaggtgctctg
gtcatatttgttgtggatgctagtggtagcatggctctgaatcgtatgcaaaatgcaaaa
ggtgcggcattgaagttgcttgcagaaagctacaccagccgagatcaggtttcaattatt
ccttttcgtggagattatgctgaggttttgttaccgccatcaagatctatagcaatggcc
cggaaacgtcttgagaagctaccatgtggtggtggttctcccttagctcatggcctcagt
acagctgtcagagtgggtctgaatgctgagaagagtggggatgttggacgtatcatgatt
gttgcaatcaccgacggaagagctaatgtatcattgaagaggtccactgatccagaagct
gctgctgcttcagatgcaccaagaccttcttctaaagaattgaaggatgagatacttgaa
gtggctggcaaaatatacaaggcaggaatgtcgcttcttgtcattgacactgagaacaag
tttgtatcaacgggatttgccaaggaagttgcgagggttgcccaaggaaaatactattac
ctgcccaacgcttcagatgctgtgatttctgctgccaccaagaccgctttgacagacttg
aagggttcatga
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