Panicum virgatum (switchgrass): 120649365 Help Entry 120649365         CDS       T07260                                  Name (RefSeq) polygalacturonase ADPG2-like   KO K01184   polygalacturonase [EC:3.2.1.15] Organism pvir  Panicum virgatum (switchgrass) Pathway pvir00040   Pentose and glucuronate interconversions pvir01100   Metabolic pathways Module pvir_M00081   Pectin degradation Brite KEGG Orthology (KO) [BR:pvir00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     120649365 Enzymes [BR:pvir01000]  3. Hydrolases   3.2  Glycosylases    3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds     3.2.1.15  endo-polygalacturonase      120649365 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD End_N_terminal Motif Other DBs NCBI-GeneID:  120649365 NCBI-ProteinID:  XP_039782084 LinkDB All DBs Position 9K:complement(3128805..3130946) Genome browser AA seq 549 aa AA seqDB search MPWACSLVTTPSSNPTRKQSNCVGWHKLALPPMASPRLVFVAPLLALLVVPAGALESAGG TTTNGTSPEGASSLVSSADGAAAGIGGGSPGSSSQGVLSLDRYGGDALAALTLASRLVFA APLLAWLFAPGALEAPGTTNGTSVDGAAAAAAGTRARPLGSSVFALDRYGARGDGRHDDT QALARAWKAACASPRPAIVLVPGGRRYLLKLVTLHGPCRSGVTLTVKGTLVASPNRADWS DRDRRLWIVFRSVHKLIVNGGGTIDGNGNKWWPHSCKINKALPCKEAPTALSFHFCTNLR VEDLKIVNSQQIHVSVEDCTNAHLARLSITAPGTSPNTDGIHITRSKDVKVTDCKIKTGD DCISIEHGTHNLHVSKVVCGPGHGISIGSLGDDNSRAEVSGIIIDTVQLYGTTNGARIKT YQGGSGYAKDITFQNMIMYNVKNPIIIDQNYCDKNKPCKEQRSAVEVSNVVFKNIRGTTI TKDAIKLKCSKHVPCHGITLQNIDLKMQGGKGATESTCQNAKWRKSGTVIPQPCTAKNYE YEGLELSSI NT seq 1650 nt NT seq  +upstreamnt  +downstreamnt atgccatgggcatgctccttggtcaccacgccatccagcaatccaacgcgaaagcagagc aactgcgttggctggcacaagctagctctgccgccaatggcgtcgccgcgtcttgtgttc gtggcgcctctcctcgcgctgctcgtggtgcccgccggcgcgctagagtccgcgggcggc acgacgactaatggcacctcgcccgagggcgcgagctccttggtcagctctgccgacggc gccgccgccgggatcgggggcgggtcgccgggctcctcgtcgcagggcgtgctcagcctc gaccgctacggcggcgacgcgctcgcggctctgacactggcgtcgcgtctcgtgttcgcg gcgcctctcctcgcgtggctcttcgcgcccggcgctctagaggccccgggcacgaccaac ggcacctccgtcgacggagcagccgccgccgccgccgggaccagggccaggccgctgggc tcgagcgtgttcgctctcgaccgctacggcgcccgcggcgacgggaggcacgacgacacg caggcgctcgccagggcgtggaaggcggcgtgcgcctcgccgcggccggccatcgtgctc gtccccggcggcaggcgctacctgctcaagctcgtcaccctccacggcccgtgcaggtcc ggcgtcacgctcacggtgaagggcacgctggtggcgtcgccgaacagggcggactggagc gacagggacaggaggctctggatcgtgttcaggagcgtccacaagctcatcgtcaatggc ggcgggaccatcgacggcaacggcaacaagtggtggccgcactcgtgcaagatcaacaag gctctcccgtgcaaggaggctccaaccgctctctcgttccacttctgcacgaatttgagg gtggaggatctgaaaattgtgaacagccagcaaatccacgtgtcggtggaagactgcacc aatgcgcacctggcacgtttgtctattactgcacctggcacgagcccaaacaccgacggc atccacatcactcgcagcaaagatgtgaaggtcacggactgcaagatcaagactggagat gattgcatatcaattgaacacgggacgcataatcttcatgtctcaaaagttgtgtgcgga ccgggtcacggaatcagcataggaagcttgggagatgacaactcgagagctgaagtatcc ggcattatcatagatacagtgcagttatacggcacaaccaatggagcacggatcaagaca taccagggaggaagcgggtatgccaaggatatcacatttcaaaatatgatcatgtataat gtcaagaacccgataatcatcgatcaaaactattgcgacaagaataagccatgcaaagaa cagaggtcagcagtggaggttagcaatgtggtattcaagaacattagggggacaacaatt accaaggacgccattaaactgaagtgcagtaagcatgtcccatgccatggcatcaccttg cagaacattgacctgaagatgcagggcgggaagggcgccacagaaagcacctgccagaat gcaaaatggaggaaatcggggaccgttatcccacagccctgcactgccaaaaactacgag tatgagggattggaattgagcagcatttaa

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