Panicum virgatum (switchgrass): 120649370
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Entry
120649370 CDS
T07260
Name
(RefSeq) 40S ribosomal protein S2-3-like
KO
K02981
small subunit ribosomal protein S2e
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120649370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120649370
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Eukaryotes
Small subunit
120649370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
120649370
NCBI-ProteinID:
XP_039782091
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All DBs
Position
9K:complement(3158179..3160098)
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AA seq
274 aa
AA seq
DB search
MAERGGERGGERGGFGRGFGRGGRGDRGGRRGGRRGQRQEEEKWVPITKLGRLVKEQKIT
KIEEIYLHSLPVKEHQIVETLLPGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDCDGHV
GLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGQPHTVPCKVTGKCGSVTVRMVP
APRGSGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWK
ETSFSRTPFQQFTDILAKPTKGLMLEAPVETVEA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggcggagagcgcggtggcgagcgcggcgggttcggccggggcttcggc
cgcggcggccgcggcgaccgtggcgggcgccgtggtgggcggcgcgggcagcgccaggag
gaggagaagtgggtccccatcaccaagctcggccgcctcgtgaaggagcagaagatcacc
aagatcgaggagatctacctgcactcgctccccgtcaaggagcaccagatcgtggagacc
ctcctccctggcctcaaggacgaggtcatgaagatcacgcccgtgcagaagcagacgcgc
gccgggcagcgcacccgcttcaaggccttcgtcgtcgtcggggactgcgacggccacgtc
gggctcggcgtcaagtgcgccaaggaggtggccaccgccatccgcggcgccatcatcctc
gccaagctctccgtcgtgcccgtcaggaggggctactggggtaacaagatcggccagccg
cacaccgtgccgtgcaaggtcaccggcaagtgcggctccgtcacagtgcgcatggtgccc
gcccccaggggttccggcatcgtcgccgcgcgcgtgcccaagaaggtgctgcagttcgct
ggcattgaggatgtcttcacctcgtcccgcggctccaccaagactcttggcaacttcgtc
aaggcaaccttcgactgcctgatgaagacctacggtttccttacacctgagttctggaag
gagaccagtttctccaggaccccgttccagcagttcactgatatcctggcaaagcctacc
aagggtcttatgcttgaggccccagttgagacagtagaggcttag
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