Panicum virgatum (switchgrass): 120649405
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Entry
120649405 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120649405
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120649405
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Porin_7
Motif
Other DBs
NCBI-GeneID:
120649405
NCBI-ProteinID:
XP_039782131
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Position
9K:3515376..3519177
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AA seq
647 aa
AA seq
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MPPKRACRLALLAAAAAYLLFLLLFELPSFSVSTAAPRGGDAAATPTHRARRRELEAAAA
SGLRSPSPLRPHKSAFPRRAPLAVSSVRFHRPNSSSSFDVSASAAFTAARPRLAHLLSYS
DYASPSSSSPSPSPSTAAPASSCPATVSAPGDRLASGGAGAVAVELPCGMAVGSRVTVVA
RPRAARAEGEPRIAERREGGAPVMVSQFMVELLGTKAVQGEEPPRVLHFNPRIRGDFSGR
PVIELNTCYRMQWAQPQRCEGFASRPDEDTVDGELKCEKWIRDDYSSSEESKMKSWLSRL
IGRPGIDWPYPFAEGKQFVLTIIAGLEGYHVNVDGRHITSFPYRTGYNLEDATELSLKGD
LDVESVFVAHLPSSPPSFSPQSYLEMSEQWKASPLPTEPVELFIGILSAANHFSERMAVR
KSWMISTRRSSNVVARFFVALNGKKEVNEELKREAEYFGDIVIVPFMDNYDLVVLKTISI
VEYGVRVVPAKHIMKCDDDTFVRIESVLDQVKKVQSGKSMYVGNINYYHRPLRSGKWSVT
YEEWPEQVYPPYANGPGYVISSDIAQYILSEFDNKALRLFKMEDVSMGMWVEKFNTTRQP
VEYLHDVRFYQPGCFDGYFTAHYQSPQHMICLWRKLQAGSAQCCNVR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagcgcgcgtgccgcctcgcgctgctggccgcggcggcggcgtacctgctc
ttcctcctcctcttcgagctcccctccttctccgtctccaccgcggctccccgcggtgga
gacgccgccgccacgcccacgcaccgcgcccgccgccgcgagctcgaggcggcggcggcc
tccgggctccgttcgccctccccgctccgcccgcacaagagcgccttcccgcgccgcgcc
ccgctcgccgtctcgtccgtccgcttccaccgccccaactcctcctcctccttcgacgtc
tccgcctccgctgccttcaccgccgcgcgtccccgcctcgcgcacctcctctcctattca
gattacgcctcgccgtcctcctcctccccttcgccgtccccttccaccgccgccccggcc
tcctcctgccccgcgacggtctcggcgcccggggaccgactcgcgagcggcggcgcggga
gcggtggcggtggagctgccgtgcgggatggcggtggggtcgcgcgtcacggtggtggcg
cggccgcgggcggcgcgggccgagggtgagccgaggatcgcggagcggagggaggggggc
gcgccggtcatggtgtcgcagttcatggtcgagctcctgggcaccaaggcggtgcagggg
gaggagccgcccagggtgctgcacttcaaccccaggatccgcggggacttcagcggccgc
cccgtcatcgagctcaacacgtgctaccggatgcagtgggcgcagccgcagcggtgcgag
gggttcgcgtcacggccggacgaggatactgttgacggggaattgaagtgtgagaaatgg
atacgggatgattacagcagctcagaagagtcaaagatgaaatcgtggttgagccgtttg
attggtaggccgggcatcgattggccatacccatttgcagagggcaagcaatttgttctg
accataatagctggtctggaaggctaccacgtcaatgttgatggccggcatatcacatcg
ttcccttaccgcactggttacaatctggaggatgcaactgaattgtctttgaaaggagac
cttgatgttgagtccgtcttcgttgctcatttgcccagttcacctcctagtttctctcca
cagagttatctcgagatgtctgaacagtggaaggcttcacccttaccaactgaacctgtg
gagctttttattggcatcctttcagctgctaaccatttttctgagcgtatggcagttcgg
aagtcatggatgatttctaccaggagatcatctaatgttgttgctcgcttctttgtggct
ctgaatggaaaaaaggaggtaaatgaagagctgaaaagggaggcagagtactttggggac
atagttatagtgccattcatggataactatgaccttgttgttctgaaaaccatttccatt
gtcgagtatggggtgagggttgttcctgcaaagcacataatgaaatgcgacgatgataca
tttgtcagaattgaatctgttttagatcaagtaaagaaggtccaaagtgggaagagcatg
tatgtaggaaatataaactactaccacaggcctttacggtctgggaaatggtctgtcaca
tatgaggaatggccagagcaagtatatcctccttatgctaatggacctggctacgtgatt
tcatcagatattgctcaatacattttatctgagtttgataacaaggcattaagactattc
aagatggaagatgtcagtatgggcatgtgggttgagaagttcaataccactcgtcagcct
gtagagtatttgcatgatgtcaggttctaccaacctggttgctttgatggttacttcacc
gcgcactaccaatccccacagcacatgatttgtttgtggagaaagttgcaagctggaagc
gctcagtgctgcaatgtgagatga
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