Panicum virgatum (switchgrass): 120649449
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Entry
120649449 CDS
T07260
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1A-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120649449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120649449
03032 DNA replication proteins [BR:
pvir03032
]
120649449
03036 Chromosome and associated proteins [BR:
pvir03036
]
120649449
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pvir02048
]
120649449
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
120649449
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120649449
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
120649449
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120649449
Prokaryotic defense system [BR:
pvir02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
120649449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
PEHE
Motif
Other DBs
NCBI-GeneID:
120649449
NCBI-ProteinID:
XP_039782174
LinkDB
All DBs
Position
9K:complement(3915159..3924404)
Genome browser
AA seq
1524 aa
AA seq
DB search
MAKHPHPAVATATGTKKRKKLQNMKVDFTENEEMVTEHEAKTESKGTIDVPIVCKRPKRA
AARSNFKEKELDLSEKDLFITVKESRVEEWEIDAVRLTKTEHEDRRPSRKLIDFTLHDAD
GNVQPFEMSEVDAIFITALVMPFDNGLEKDREKGIRCSGFGRIKDWKISGYNEGIAVIWV
STEIADYKCVKPASSYRSYFEHFSEKTRVCVEVYRKLVKSVGGNPQIGLEELLSSVIRSI
NSSRKSGGTMSKDFVISIGEFIYNQLVVLDNTPAINDEIFATLPVLIALRNESKSRVEIN
KFSAIPSSGTLKIKDELCKVVGEDDEKLARLLQEEEEWKMMKQRRKRGTSQKNVYIKISE
TEIANDYPLPSYYKSYSQEMDEYIFDSDIDMFSGDMPVRILNNWALYNSDSRLIPLELIP
MKSGAENDTVIFGSGFMREDDGSCCSTAESAQLSSSSSKSCQEDQGISIYLSPIKEWVIE
FGGSMICITIRTDVAWYKLRQPTKQYAPWCEPVLKTARLAVSIITLLKEQSRASKLSFTE
VIKKVAEFDSGHPAFISSSTTVVETYVVVHGQIILQQFADFPDDSIRRSAFVTGLVLKME
ERRHTKLVMKKKSQSMRGENLNPSAKMGPILRRKLMRATTTRFISKIWGDYYAAHFPEDT
MIDGNEQKEIDEEQEENEDDTEEEVIVEIEQPVRTPPSTRSRRSPSKTCKEVDWKGETAG
KTVSGEVIYKCVTVRGLTIRVGQSVTLEDDSGEAIMCFTEYMYEKHDGTKMVHGRILQKG
FQTILGNAANEREVFLTNDCLEFEVGDIKELVTVNVQLVPWGYKYRKENSEVNRIERAKA
EERKRKGLPVEYFCKSLYWPEKGGFFSVPHDKLGIGTGACSSCKERKQVGDEFKILSEAS
FVFKNIRYNVNDYLYVRPEFFSQWEGHETYKAGRNVGLKPYAVCHVLSIHAPAGSNKAHP
ESTKVNVRRFYRPDDISSTKAYASDIREVYYSEDTLTVPVAMIEGKCEVRIKDDLPNSDL
PVVAEHVFYCEHLFDPATGALKQLPHNVKIMSLIRRAPSTSKKNKGKQICEHELAGSDKN
KDTLSENALATLDIFAGCGGLSEGLQLAGASQTKWAIEYEEPAGEAFGENHPEAAVFVEN
CNVILKAIMDKCGDADDCISTSEAAERASKLSDGKTKNLPVPGEVDFINGGPPCQGFSGM
NRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKCQTFRLTLASLLEMGY
QVRFGILEAGAYGVAQSRKRAFIWAAAPGEILPEWPEPMHVFASPELKINLPDGKYYAAV
KSTAAGAPFRSITVRDTVGDLPPVENGASKPTIQYGSEPVSWFQKKIRRNTMSLNDHISK
EMNELNLIRCKHIPKRPGCDWHDLPDEKVKLSTGQLVDLIPWCLPNTAKRHNQWKGLYGR
LDWDGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQCKHRQI
GNAVPPPLAYALGRKLKEAIDAKR
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcatccacatcctgctgttgcaacagctacagggacaaagaagcggaaaaag
cttcagaatatgaaagttgatttcaccgagaatgaagaaatggtgactgaacatgaggct
aaaacagagagcaagggcaccattgatgttcctattgtgtgcaagagaccaaagagggca
gctgctcgttctaatttcaaagagaaggaattggacttatctgaaaaagatttatttatc
acagtcaaggaaagtagggtggaagaatgggaaatagatgctgtcaggttgacaaaaaca
gaacatgaagatcgtcgaccttccagaaaactcattgatttcaccttgcatgatgcagat
ggtaatgtgcagccctttgaaatgtctgaagttgatgctattttcataacagctcttgtc
atgccctttgacaatggtctggaaaaggatagagaaaagggtatacgctgttcaggattt
gggcgaattaaggactggaaaatttctgggtacaatgaaggtattgctgtaatttgggtt
tcaacagaaatagctgattacaaatgtgtgaagccggcaagcagttatagatcctatttt
gaacacttcagtgagaagactcgagtctgtgttgaagtttacaggaagttagttaaatca
gttggtggaaatcctcagataggcctggaagagttgctttctagtgttattcgttccatt
aattcaagcagaaaatctggtgggacaatgagcaaagactttgtcatctccattggtgag
ttcatatacaaccaacttgttgtattagataatacaccagccatcaatgatgagatattt
gccacacttcctgttcttattgcactaagaaatgaaagtaagtctagagtagaaatcaac
aagttctctgctatcccttcaagtggaactctgaagataaaggatgagctgtgtaaggta
gtaggcgaggatgatgagaaattagcaagactgttgcaggaagaggaggaatggaagatg
atgaagcagagacggaaacgtggaacctcacagaaaaatgtctacatcaaaattagtgaa
actgagattgcaaatgactatccattgccatcttactataaatcatatagtcaagaaatg
gacgagtacatatttgatagtgacattgacatgttttctggtgatatgcccgtgagaatc
cttaacaactgggctctttataattcagattccagactcattcctttggagctcatccct
atgaaatcaggagctgaaaatgatacagtgatctttggatctggttttatgagagaagat
gatggtagttgctgttcaactgctgagtcagcacagttatcttcttcctcaagtaaatca
tgccaagaagatcagggaatttcaatttatctgagcccaataaaggagtgggttattgaa
tttggtggttcaatgatctgcataaccattcgaactgacgtggcttggtacaaattacgc
cagccaacaaagcaatatgctccatggtgtgagcccgtgctgaaaacagcaaggctggct
gttagcatcatcacccttttaaaagaacaaagtcgtgcttcaaagcttagtttcaccgaa
gtgattaaaaaagtagcagaattcgacagtggacaccctgcatttatatcatcaagcaca
actgttgttgaaacatatgttgtggtacatggacaaattatacttcagcagtttgcagac
tttccagatgattctatccgacggagtgcttttgtcacaggcctcgtactgaagatggaa
gaaaggagacatacaaagttggtaatgaagaaaaaatctcaatcgatgagaggagagaat
ctgaacccaagtgcaaaaatgggcccaatattaagaaggaagcttatgcgtgcaacaact
acaagattcatcagcaagatatggggtgattattatgccgcacacttcccagaagatact
atgatagatggaaatgaacaaaaggaaattgatgaggagcaagaagaaaatgaagatgat
actgaagaggaggttatcgttgaaattgaacagcctgtgaggaccccaccatcaacacgg
tctagaaggtcaccatcaaagacttgcaaagaagttgactggaaaggggaaactgctgga
aaaacagtgtctggggaagttatatacaaatgtgttacagttcgaggtcttactattcgt
gttggtcagtcagtcacattggaagatgattcaggagaagctatcatgtgctttactgag
tacatgtatgagaaacatgatggtacgaaaatggttcatggaagaattctgcaaaaaggt
tttcagactatccttggcaatgctgcaaatgaaagggaggttttcttgactaatgattgt
ctagaattcgaagtaggtgacatcaaagaattggtgactgttaatgtccaattggtgccc
tggggctacaaatacaggaaagagaattcagaagttaataggattgagagggcgaaggca
gaggagaggaagaggaagggtctacctgtcgaatatttttgcaaaagcttatactggcca
gagaaaggtggtttcttctctgttcctcatgataaacttggcattggaactggtgcctgt
agctcctgtaaggagagaaaacaagttggtgatgaattcaagatactttcagaggccagt
tttgtcttcaagaatatcagatacaatgtcaatgactatctgtatgttaggcctgaattt
ttctcccaatgggagggccacgagacctacaaagctggaagaaacgtgggcctaaagcct
tatgctgtatgtcatgtgttgagtatccatgctcctgctggatctaataaagcacatcca
gaatcgacaaaagtcaatgtaagaaggttttacaggcctgatgacatatcatcaacaaaa
gcctatgcatcagatatcagagaggtatactacagtgaagataccttgactgtaccagtg
gccatgattgagggaaaatgtgaagttaggattaaggacgaccttccaaattcagatctt
ccagtggtggctgagcacgtattttactgtgaacatttgttcgatcctgctactggggcc
ctgaaacagcttccacacaatgttaaaataatgtcactgataaggagggcaccttccact
tcaaagaagaataaaggaaagcaaatttgtgagcatgagctagctggttcagacaaaaat
aaggatacgctatcagagaatgctcttgcaacccttgatattttcgctggctgcggaggt
ttatctgaaggattgcagctagctggagcatcacaaacaaagtgggcaattgaatatgaa
gagcctgctggggaagcatttggtgaaaatcatccagaagcagcagtatttgtggagaac
tgcaatgtgattttgaaggcaataatggataagtgtggtgatgctgatgattgcatatct
acttctgaggctgctgaacgagcatcaaaactttctgatgggaagaccaagaatctgcct
gtgcctggcgaagtagactttatcaatggtggacctccatgtcagggtttttctggaatg
aacagattcaatcaaagtccctggagcaaggttcagtgtgagatgatcctagcattcctc
tcttttgcggaatatttccgccctagattctttctcctagaaaatgtcaggaacttcgtt
tcgttcaacaaatgccagaccttcagactaacacttgcatcactccttgagatgggatac
caggttcgatttggcattctagaggcaggtgcctatggtgtcgcccagtccaggaaaagg
gcattcatctgggctgccgcacccggggaaatccttccggagtggcctgaaccaatgcac
gtctttgctagccctgagctgaagataaacctacctgatggcaaatactacgcggctgtc
aagagcactgccgcaggggcacctttccggtcaataacagttagagatacagttggggat
ctcccacctgtggaaaatggcgccagcaagccaacaatacagtatgggagcgagccagtg
tcatggttccagaagaagatcaggcgcaacacgatgtcgttgaatgaccacatctccaag
gagatgaacgagctgaatctcatcaggtgcaagcacattccaaagagacctggctgtgac
tggcatgacctgccagatgagaaggtgaagctgtcaaccgggcaactggtggacctgata
ccctggtgcctgcccaacacagccaaaaggcacaatcagtggaaggggctgtatggaagg
ctggactgggacggcaatttccccacctctgtgaccgatccccagcctatgggcaaggtc
ggcatgtgcttccaccctgagcaggacaggatcatcacagtccgtgagtgtgccaggtct
cagggcttccctgacagctaccggttcgcgggcaacatccagtgcaagcacaggcagatc
gggaatgccgtgccgcctccgcttgcctacgcgctcgggaggaagctcaaggaagccatc
gacgccaagcgctga
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