Panicum virgatum (switchgrass): 120649499
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Entry
120649499 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 5-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120649499
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120649499
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
TRAF-mep_MATH
BACK
MATH
BTB_2
Motif
Other DBs
NCBI-GeneID:
120649499
NCBI-ProteinID:
XP_039782244
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Position
9K:4366374..4370113
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AA seq
428 aa
AA seq
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MEDEDAGPGGGGEASPPHHAAASGDRARDMAASPTSSRSVTQTVNGSHRFVIQGYSLAKG
MGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLD
QSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRTALETSDFLKDDCLKINCTVG
VVVSTMDYSRPHSIEVPESDIGYHFGTLLDTQEGVDVIFRVAGEEFHAHKLVLAARSSFF
RSEFFDHESDEEKNEADVWNEIKEIVIDDMDPKVFRAVLHFIYRDNLVNDDELSASSSDC
SIFDTLAGKLMAAADKYDLPRLRLLCESYLCKHISVNSVATTLALADQHHAMELKSVCLK
FAAENLSAVIRTEGFDYLKDNCPSLQSEILRTVAGCEEQCSSGGKSQSVWAQLSDGGDTS
GRRVRPRV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagacgccggccccggcggcgggggcgaggcctcccctccgcaccacgcc
gcggcgtcgggcgaccgggcgcgggacatggcggcgtccccgacgagctcgcggtccgtg
acgcagacggtgaacgggtcgcaccggttcgtgatccaggggtactcgctcgccaagggc
atgggcgtggggaagcacatcgccagcgagaccttcacggtgggcgggtaccagtgggcg
atctacttctaccccgatgggaagaatcccgaggacaactccgcctacgtctccgtcttc
atcgccctcgcgtccgagggcaccgacgtgcgcgcgctcttcgagctcacgctcctcgac
cagagcggcaagggcaagcacaaggtgcactcccacttcgaccgctccctcgagtctggg
ccgtacaccctcaagtaccgcggatccatgtggggctataaaaggttctttcggcgtact
gctcttgagacatcagattttcttaaagatgattgcttgaagataaattgtactgtgggc
gttgtagtatcaactatggattattctagaccacactcgatagaggttccagagtctgac
ataggctatcattttggaacgcttttggacactcaggaaggtgtagatgttatttttaga
gtagcaggagaggagtttcatgcccacaagttggtattggctgcccgatcttcctttttt
aggtcagagtttttcgatcatgaatcagatgaagaaaagaatgaagctgatgtttggaat
gaaatcaaagagatcgtcattgatgacatggatcctaaagtgttcagagctgtgcttcat
tttatctacagggacaatcttgttaatgatgatgagttatctgcatcaagctccgactgc
tccatctttgatactttagctggaaagttaatggctgcagcagacaaatatgatttgcca
aggctaagattgttgtgcgagtcttacttgtgcaagcatatttctgtaaactctgtggca
actactttagcattggctgatcagcaccatgctatggagcttaaatctgtttgcctgaaa
tttgctgctgaaaatctctcagctgtgatccggactgagggatttgattacctcaaagac
aactgcccatcgctgcagtcagagatactgcggacggttgccggttgcgaggagcagtgc
agcagcggtgggaaaagccagagtgtatgggcgcagctatcggacggtggcgacaccagc
ggccgcagggtgaggccgagggtctga
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