Panicum virgatum (switchgrass): 120649532
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Entry
120649532 CDS
T07260
Name
(RefSeq) tubby-like F-box protein 5
KO
K19600
tubby and related proteins
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120649532
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120649532
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120649532
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
Tubby family proteins
120649532
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
120649532
NCBI-ProteinID:
XP_039782289
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All DBs
Position
1K:48287174..48290632
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AA seq
430 aa
AA seq
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MSLKSIVGQLKEIRDGIGSMSRRAGGSDGRAGHGRAGSRHSWPGLWAEQPQRHGRGKEGP
PPPQQHQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAHVCRSWREITKEVVKTLE
ECGRITFPISLKQPGPREQPVQCFVRRDRATSTYLLYLGLSPSLNVENDKLLLAARKVRR
ATRTSFVISLASDDFSHSSSTYVGKLKPNFLGTKFTIFDSQPPPDVVVLPNNKPSKRQSK
QVSPRLPLGNYNVATVTYELTVLRNRGPRRMQCTMHSIPAQCIQEGGKAPTPTGTIHSLD
EPVSTLPSTKGKEPAAEFSSTSLSADLSGPACTDEEPLVLKNKAPRWHEQLQCWCLNFRG
RVTVASVKNFQLVASVDPSLNIPAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICL
TSFDTKPACE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaagagcattgttgggcaactgaaggagataagggacggcatcgggagcatg
tcgaggcgcgccgggggctccgatgggcgcgccggccacggccgcgcggggtcgcggcat
tcttggcctggcctttgggctgaacagccgcagcggcatggccggggcaaggaggggccg
ccgcctccgcagcagcatcaggggcggtgggcgaacctgccgccggaactgctgctggat
gtgatacagagggtggaggctagcgaggcgacgtggccggcgcggcgccaggtcgtcgcg
tgcgcgcacgtttgccggtcgtggcgtgagatcaccaaggaggtggtgaagacgctcgaa
gagtgcggcaggatcaccttccccatatccctcaagcagccgggacctcgcgagcagccg
gtgcagtgctttgtaaggagggacagggcgacatccacatatctcctctacctagggctc
agcccatctctgaatgtggaaaacgacaagcttttgcttgcagctcgtaaggtcaggcgt
gccacgaggacttcttttgtgatctcactggcctctgatgatttctctcactccagcagc
acctacgttggtaaactgaagccaaactttcttggcacaaagttcacaatctttgacagc
cagcctcctcctgacgttgtggtgctaccaaacaataaaccaagcaaaaggcagtcgaaa
caagtatcaccaagactgccacttggcaattacaatgttgctacagttacatatgagctc
actgtcctacgcaatcggggaccaaggagaatgcaatgcaccatgcactcaataccagct
cagtgcattcaggagggtgggaaggccccaacgcctactggcaccatccactcacttgat
gagccagtgtccacattaccaagtaccaaaggaaaggaaccagctgccgaattttcatca
acaagcctcagtgctgatctgtctggacccgcttgtacggatgaagagcctttagttctg
aagaataaagccccacgttggcatgagcaactgcagtgctggtgcctcaacttccggggg
cgcgtcaccgttgcatcggtcaagaacttccagcttgttgcctctgttgatccttccctc
aacatccccgcagctgagcaggagaaggtgatcctccagtttgggaagatagggaaggat
attttcaccatggactaccggtacccgctctcggcgttccaagccttcgcgatctgcctg
accagctttgacaccaaaccggcatgcgaataa
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