Panicum virgatum (switchgrass): 120649539
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Entry
120649539 CDS
T07260
Name
(RefSeq) transcription termination factor MTEF1, chloroplastic-like
KO
K15031
mitochondrial transcription termination factor family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120649539
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120649539
Translation factors [BR:
pvir03012
]
Eukaryotic type
Release factors
120649539
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120649539
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Gene cluster
GFIT
Motif
Pfam:
mTERF
MUCL1
Motif
Other DBs
NCBI-GeneID:
120649539
NCBI-ProteinID:
XP_039782292
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Position
9K:4767867..4769325
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AA seq
319 aa
AA seq
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MPLCSFYASTSLPVAKPQQSVASSNKPHSTAAASVATTAPTRSATATVSTATAALSLHLP
ELPSQVKDKILSLELMGVDYGRALELNPALRDAAPESIHAVVSFLQSRGLHFKDLGRVFG
MCPSVLTASVRADLRPVFAFLSEDLGVPESAHRRVVVKCPRVLACSVRDQLRPALIYLCR
LGFRDTRALALQDPILLVSSVERTLAPKLQFLAGLGMSRDDAVAMVLRCPALFTFSIERN
YRPKFEYLVEAMGGGVEDIKAFPQFFAFSLEKRIAPRHRAVEEAGVTMPLPDMLKATDEE
FTEMLEKERRLQEQAAATD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccgctctgcagcttctacgcctccacctccctccccgtcgccaagccgcagcagtcc
gtcgcgtcctctaataagcctcactccaccgccgcggcctccgtggcgaccaccgcgccg
acgcgcagcgcgacggcgactgtgtccacggccacggcggcgctgtcgctgcacctcccc
gagctgccgtcgcaggtgaaggacaagatcctgagcctggagctgatgggcgtggactac
gggcgcgcgctggagctgaaccctgcgctccgcgacgcggcgccggagtccatccacgcg
gtggtgtccttcctccagtcccgcgggctccacttcaaggacctcggccgcgtcttcggc
atgtgcccgtccgtgctcaccgccagcgtccgcgccgacctccgccccgtcttcgccttc
ctctccgaggacctcggcgtcccggagtccgcgcaccgccgcgtcgtcgtcaagtgcccg
cgcgtgctcgcctgcagcgtccgcgaccagctccgccccgcgctcatctacctctgccgc
ctgggcttccgggacacccgcgcgctggcgctgcaggaccccatcctcctcgtctccagc
gtggagcgcaccctggcgcccaagctccagttcctggccgggctcggcatgtcccgggac
gacgccgtcgccatggtgctgcggtgcccggcgctcttcaccttcagcatcgagcgcaac
tacaggcccaagttcgagtacctggtggaggccatgggcggcggcgtggaggacatcaag
gcgttcccgcagttcttcgccttcagcctcgagaagcggatcgcgccgcgccaccgcgca
gtggaagaggccggcgtcacgatgccgctgccggacatgctcaaggccaccgacgaggag
ttcacggagatgctcgagaaggagcggaggctgcaggagcaggccgcagcgacagactga
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