Panicum virgatum (switchgrass): 120649662
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Entry
120649662 CDS
T07260
Name
(RefSeq) upstream activation factor subunit spp27-like
KO
K15223
upstream activation factor subunit UAF30
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120649662
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
120649662
BRITE hierarchy
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GFIT
Motif
Pfam:
SWIB
DEK_C
SRP54_N
PGA2
Prothymosin
RP853
CDC45
Nop14
CCDC106
Motif
Other DBs
NCBI-GeneID:
120649662
NCBI-ProteinID:
XP_039782453
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All DBs
Position
9K:complement(6143801..6151399)
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AA seq
335 aa
AA seq
DB search
MVSDSELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFLAEVAA
KAEPEEPKEEEPEEAAVPKEEEPGVEPEEGEGEGEEEEGEGEEEEEEEEEEDEDGDSAAA
RKKQRSDKGNGAKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQN
NKRKILPDERLKKIFNVNSIDMFQMNKALTKHIWPLNSEGPASPDRSTPKEKPQKRDRNE
GKKQKGGSSGSGSGLLMPLQLSDDLVKFIGTGESMLSRSDVVKRMWEYIKENNLQDPSDR
RKIICDEKLKDLLQVESFNGFTVSKLLAPHFTKTK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggagctggtggagcggctgcaggaggtgctgcggtcgtcggacctc
aacaccacgaccaccgccgccctgcgccgccgcctcgaggaggacttcggcgccgacctc
tcccacaagaaggccttcatccgggagcaggtcgacctcttcctcgccgaggtcgccgca
aaggccgagccggaggagcccaaggaggaggagcccgaggaggcagcggtgcccaaggag
gaggagccgggggtggagccggaggagggcgagggggagggggaggaggaggagggcgag
ggggaagaggaggaagaggaggaggaggaagaagacgaggatggggatagcgccgccgcc
cggaagaagcagcgatcggataaaggtaatggtgccaagaaaaggggtggtggctttaca
aaattatgcagtctttcccctgcacttcaagagtttgttggtgcctctgagttagccagg
acagaggttgtgaagaagctttgggcatatattagagaaaataatctacaagatcaaaac
aataagaggaagattttgcctgatgaaagattgaagaagatcttcaatgtgaattccatc
gatatgttccaaatgaataaagctttgaccaagcatatctggccattgaattctgagggt
cctgcctctcctgacagatcaacacccaaagagaagccacaaaagagagacaggaatgaa
ggaaagaagcaaaagggtggctcttcggggtctggatctggtcttcttatgccccttcag
ctttccgatgatttagtgaaatttattggcaccggtgagagtatgttatcacgatcagat
gttgtgaagagaatgtgggaatacataaaagagaacaacctgcaggatccttctgatcgg
aggaaaataatctgcgatgagaagctgaaggacctattgcaagttgaatcgttcaacggc
ttcacggtttcaaagctacttgcgccccattttaccaagacaaagtag
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