Panicum virgatum (switchgrass): 120649665
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Entry
120649665 CDS
T07260
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120649665
04141 Protein processing in endoplasmic reticulum
120649665
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120649665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120649665
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvir02044
]
120649665
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
120649665
Secretion system [BR:
pvir02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120649665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
120649665
NCBI-ProteinID:
XP_039782457
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Position
9K:6236578..6240282
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AA seq
475 aa
AA seq
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MAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQK
LLGILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
NLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSAL
ITNLYFISQLLYRKYSGNFLVNLLGKWKESEYSGHSVPVGGLAYYVTAPSSLADVLANPF
HALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPT
AAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgggtttcgagtactgcatcttgtcaggccctttctggctttcttgccagaa
gttcagagtgctgataggaaaataccattcagagagaaagtgatctacaccgtcatttct
ctctttattttcctggtctgcagccagctcccgctctatggcattcattctactactggg
gcagaccctttctactggatgcgtgttattcttgcatcaaaccgtggtactgttatggag
ctgggtatcactccaattgtgacatctgggatggtgatgcaacttctagtgggatcaaag
attattgaagttgacaacagtgtgagggaggatcgtgctctgctaaatggtgctcagaag
ctgcttggtatcctcattgctattggagaagctgtggcatatgttctctctggaatgtat
ggcagtgtgagccaacttggcactgggaatgctattctcattatacttcagcttttcttt
gctggcatcattgtcatctgtctggatgaactcctacagaaaggctatggtttgggttct
ggtatctctctgttcattgctactaatatctgtgagaacatcatctggaaggcatttagc
ccaacaaccatcaacagtgggcgtggtgctgaatttgaaggggctgtcattgctttgttc
catcttttgattactcgaactgataaagtccgtgctctacgcgaggctttctatcgtcag
aatcttccaaatgtgaccaatttacttgctactgtcttggtcttcctcatagttatctac
ttccaaggcttccgtgttgtgcttccagtgagatcaaagaatgctcgtggtcaacaaggc
tcgtacccaatcaagctattctacacttccaacatgcctatcattctgcactctgcactg
attaccaacctctatttcatatcccagcttctctacaggaaatacagtggaaatttcctt
gttaaccttcttgggaaatggaaggaatccgagtactctggtcattctgttcctgttggt
ggtcttgcttactatgttactgcaccatcaagcttggctgatgttctggcaaatccattc
catgcattgttctatgtggtcttcatgctgtcagcttgtgctctcttctcaaagacatgg
attgaagtttctggttcatcagcaaaggatgttgctaagcagctgaaggaacaacaaatg
gtgatgccaggccatcgtgagtcaaacctgcagaaggaactgaacagatacatccccact
gctgctgcatttggtggagtatgcattggtgcattgactgttctagctgattttatgggc
gcaattggctcaggaacgggtattctgcttgctgtcaccatcatataccagtactttgag
acattcgagaaggaaagggcaaccgagcttggtttctttggtttctaa
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