Panicum virgatum (switchgrass): 120649766
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Entry
120649766 CDS
T07260
Name
(RefSeq) histone-lysine N-methyltransferase SUVR5-like
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_3rep
SET
Pre-SET
zf-C2H2
zf-C2H2_4
zf-TRM13_CCCH
Motif
Other DBs
NCBI-GeneID:
120649766
NCBI-ProteinID:
XP_039782584
LinkDB
All DBs
Position
1K:48443309..48455583
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AA seq
1605 aa
AA seq
DB search
MLMDPPVMQVDCQLQNDVEKTSSYDRKLTVSHGDYGWAGSDVRPANDAIICNPNEVDNAS
QTGTDEVLDSSSKRSPINLDDLPQGAELIEKDGDDSHSNDVKLQLNVSTETNNGLQSDDG
NFNKQSFCKEDRHHPQEEIHPPTTVSLPSSCKLNGDAMPSQEEKIKEEHVKVDGIVNAVT
KEVGTDLVGCHAGQKELQCTLQDLSEIACSIGLVRNKSSPQEETNVSVSPLNDTGNNVDN
RSCNGDANCKGEELNMGNPGDEDHAVALWVKWRGKWQTGIRCCRVDYPLTTVKAKPTHDR
KSYIVVFFPRTKTYSWVDMLLVLPIEECPLPLVNGTHRKWRKLVKDLSVPRRFIMQKLAI
LMLNLSDELHIEALSDNARKATTWKEFALEASCCRDYTDLGKMLNKLQNMILPDYISCQW
LQNSFDMWNQKCMNARDAETIEMLYEELRQSILWSKIEELWNASVQPELVPDWKTWKQEV
MKQYFSSHHSGNVANFEKNNCYNDPALDQQVSRKRPKLEVRRGDTQILHMGEADGRTANE
DPNRNNLPSNSVRHEAVGAFGAINQNTAATFFGNSGVIEITASGSANPALQNARLELDSF
KSSRQCSAYIESKGRQCGRWANDGDIYCCVHQSMHFLDHSSREDKTLTVEAPLCSGMTNM
GRKCKHRAQHGTTFCKKHRLRTNLDSMHPENLLGSSEVPHMREESPNKGVEEISRSQSMY
SIDSETDMNSQAAVQVKLILTVATEISAEKSCAMEKIDLCAASTSITNTDDVPLCIGIRS
HDSIVECQDYAKRHTLYCEKHLPKFLKRARNGKSRLVSKDVFVNVLKGCTSRKDKICLHQ
ACEFLYWFLRNNLSHQRTGLSSDHMPQILAAAAKNPDVGQFLLKLIATEREKLENLWGFG
SNRSKQIYSEDKQGSAVLLHGEGTNLSSGLKCKICTHEFSDDQALGLHWTSVHKKESRWL
FRGYSCAVCMESFTNKKVLERHVQDVHGAQYLQYSILIRCMSCNSNFLNTDLLYPHIVSD
HAQQFRLLDVPQRPNGRSVQQTEGTSGVALYDNHDVEKDDGSQKFICSLCGLRFDLLPDL
GRHHQVAHMDSGAEGPIPLGRGKYQLNRGRHYYSAYKKSLRPTSTLKKRSSSGIEKTFKF
QSSGLSMVTSQIVESETASLGKLPDLQCSDVAETLFSKIQKTRPHPSNLDILSVARSVCC
KASLLTALEVKYGSLPENIFVKAAKLCSDNGIQIDWHQEEFICPKGCKSGYNSNALPPLQ
FIPAEFPEAPSVIDPPNDNDMWDMDEYHYVLDSKHFGWKLKKERVVLCEDVSFGREKVPI
VCVIDVDAKDSFSMKPEELLPHGSSVPWQGLHYITKRVMDSSLVDSENTMPGCACSHTEC
SPEKCGHVSLFDGVYNNLVDIHGTPMLGRFAYDEDSKIILQEGYPIYECNSSCTCDSSCQ
NKVLQKGLLVKLELFRTENKGWAIRAAEPIPQGTFVCEYVGEVLKTDEAMKNGERVSSSD
CSYLFDITSQIDRERVQTVGTVNYMIDATRSGNVSRFINHSCSPNLSTRLVLVENKDCQL
AHIGLFANQDIAVGEELAYDYRKKLVARDGCPCHCGAKNCRGRVY
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggaccctcctgttatgcaagtggattgccagttgcaaaatgacgtggaaaaa
acatcatcctatgacaggaagctgaccgtctcacacggtgattatgggtgggcaggctct
gatgtccgcccagcaaatgatgcaataatctgtaacccaaatgaggttgacaatgcttct
caaacgggcacagatgaggtattagattcttcttccaaaagatctcctattaacttggat
gatttacctcagggggcagaattaatagagaaggatggtgacgattctcactccaatgat
gtaaaacttcagttgaatgtaagcactgaaactaataatggcttgcaaagtgatgatggc
aactttaataaacaaagtttttgtaaagaggataggcatcatcctcaggaagagatacat
cctcccaccacagtctcactaccaagttcatgcaaactcaatggagatgccatgccttct
caagaagagaaaataaaagaagagcatgtcaaagtagatggaattgttaatgcagtaact
aaggaagtcggaactgacttggtaggatgccatgcggggcagaaagaattgcagtgcacg
ctacaagatctatcagaaatagcctgcagtattggtttagtacgtaacaaatcttctcca
caggaagagaccaatgtgtctgtttcgcctttaaatgacacaggcaataatgttgataac
cgtagttgtaatggtgatgccaattgcaaaggggaagagctcaatatgggtaaccctgga
gatgaagatcatgctgtagcactttgggtgaagtggagaggaaaatggcaaacaggaatt
cgatgctgtagagtagactatcctttaacaactgtaaaggcaaaaccaacacatgacagg
aagagctatattgttgttttcttccctcggacgaaaacttattcttgggtagacatgcta
cttgttctaccaatagaggaatgtcctttgccacttgtgaatggaactcatcgtaaatgg
agaaagctggtgaaggatttgagcgttcctcggcgattcatcatgcagaaacttgccatt
ttaatgctaaatttgagtgatgagcttcatattgaggctttaagtgataatgctcggaag
gccacaacttggaaagaatttgctctggaagcgtcttgctgtagagattacactgatctt
gggaagatgctcaacaaactacaaaatatgattcttccggactatataagctgccagtgg
ctacaaaattcttttgacatgtggaaccaaaagtgtatgaatgcacgtgatgctgagact
attgaaatgctttatgaggaacttaggcaatctattctttggagcaagattgaggaattg
tggaatgcatcggtgcagcctgaattagtccctgattggaaaacatggaaacaagaagtc
atgaaacaatacttttcatcacatcattctggtaatgttgccaactttgagaaaaacaat
tgttacaacgatccagctttagatcaacaagttagtagaaagcgtccgaaacttgaagtt
cgcagaggggatactcaaattttacacatgggtgaggctgatggccggactgcaaatgaa
gacccgaaccgaaataatcttcctagtaactctgtcaggcatgaagctgtaggtgcattt
ggagcaataaatcagaatactgccgccaccttctttggaaattctggtgttattgagatc
acagcatctggtagtgccaatccagctttgcagaatgctagacttgagttagattcattc
aagagttctcggcagtgttctgcatacattgaatcaaagggaagacagtgtggtaggtgg
gcaaatgatggtgatatttactgttgcgtgcaccaaagtatgcattttcttgaccattct
tctagggaggacaagacacttactgttgaagctccattgtgcagtggcatgactaatatg
ggtagaaaatgcaagcatcgagctcagcatggtactactttttgtaaaaagcaccgcctc
cgaacaaacttggattcaatgcacccagagaatttgttgggttcatctgaggtaccccat
atgagggaagaatctccaaacaagggggtagaagaaatttctaggtcacagtcgatgtac
agcattgactctgaaacagacatgaattcccaggctgctgtacaggtgaaattgatactg
actgtggctacagagatctcagctgaaaaatcttgtgcaatggagaaaattgatctgtgt
gctgcgtcaacctccatcacaaatactgatgatgttcctctttgtattggaattcgctct
catgacagtattgtcgagtgccaagattatgccaagcgacatactctttactgtgagaag
caccttccaaagttccttaaacgtgccaggaatggaaagagtcgacttgtttctaaagat
gtctttgtcaatgttctgaagggttgtacatcaaggaaagataaaatatgtttacaccaa
gcatgtgaatttctttattggtttttgagaaacaacctttctcatcaacgcaccggtctt
agtagtgaccatatgccccagatactggctgcagcggctaaaaatccagatgttggacag
tttttgttgaagttgatagctactgagagagagaaactggaaaatctctggggctttggt
tcaaatagatctaagcaaatctattctgaagacaaacaaggatctgcagtgctattgcac
ggagagggaactaatctttcatctggtttgaagtgcaaaatttgtactcacgagttctct
gatgatcaagctcttggattacattggacgtcggtccacaaaaaggaatcccggtggctg
tttagaggttattcttgtgctgtatgcatggaatcatttaccaacaagaaagttcttgaa
agacatgtgcaggatgtacatggagctcagtacctccagtattcaattctcattcgatgt
atgtcatgcaatagcaattttttgaacacagatctgttgtacccacacattgtttctgat
catgcacaacagttcaggcttcttgatgtccctcaaagacctaatggtcgatctgttcaa
caaacagaagggacaagtggtgtggccctttatgataaccacgatgttgagaaggatgat
ggatcacagaagttcatctgcagcttatgcgggctcagatttgatcttctaccagatctt
ggccgccaccatcaagtcgctcatatggactcaggtgctgagggccccattccactggga
cgggggaagtatcagcttaaccgtggccgacactactattctgcttacaagaaaagttta
cggccaacaagtacattaaagaagaggagtagctctggaattgagaaaacttttaagttc
caaagctctggcctatctatggtaacgtcacaaatagttgaatctgaaacagccagcctt
ggtaagttaccagacttacaatgctcagatgttgcagaaactttattttccaagattcaa
aagacaagaccccatccaagcaaccttgatattttgtctgttgcccgttctgtatgctgt
aaggcaagtcttcttactgcactggaagttaaatatggatctctacctgagaacatattt
gtgaaagctgcaaaactatgtagtgacaatggcatccaaattgattggcaccaagaggaa
tttatttgccctaaaggttgcaaatctggatataattcaaatgctttgcctcctctacag
ttcatcccagctgaatttccagaagctccttctgtgattgatcctccaaatgacaatgac
atgtgggacatggatgaatatcattatgttcttgattcaaagcattttggctggaagctt
aaaaaggagagggttgttctatgtgaagatgtaagctttggcagggagaaagttccaatt
gtctgtgttattgatgtcgatgcaaaagattctttcagtatgaagcctgaagaacttctg
ccacatggcagttctgtgccttggcaaggtttacactatatcacaaagcgcgtgatggat
tcatctcttgttgattcagagaacactatgcctgggtgtgcatgttctcataccgaatgc
tcccctgagaaatgtggtcacgtgagtctctttgacggtgtttataataacctggtggat
atccatggaacaccaatgcttggcagatttgcatatgatgaagatagtaagattatttta
caggaagggtatccaatatatgagtgcaattcatcatgtacttgtgattcatcctgccag
aataaagtattgcagaaaggcctgcttgttaagttggaactctttagaactgagaataag
ggttgggctattagagctgctgaacctattccacagggcaccttcgtctgcgagtatgtt
ggcgaagtcctaaagactgatgaggccatgaaaaatggagaaagggtgtcaagtagtgac
tgcagttacttgtttgacattacttctcagattgatagggaaagagttcagactgtaggg
accgtcaactacatgattgatgccacaagatctggaaatgtatcccgctttattaatcac
agctgttcgccaaatctcagtacccgtttggttttggttgagaacaaagattgccagctt
gctcacattggcttgtttgctaatcaagacattgctgtgggagaagaacttgcatatgat
taccgaaaaaagcttgtagcacgcgatggctgcccctgccattgtggagccaagaattgc
cgaggccgggtctattaa
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