Panicum virgatum (switchgrass): 120649774
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Entry
120649774 CDS
T07260
Name
(RefSeq) myosin-12-like
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120649774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120649774
04131 Membrane trafficking [BR:
pvir04131
]
120649774
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120649774
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120649774
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120649774
mRNA cycle factors
P-body specific factors
120649774
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120649774
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120649774
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120649774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
AAA_16
HAMP
AAA_22
AAA_6
nSTAND3
CdiA_helical
DUF1664
CbiA
Motif
Other DBs
NCBI-GeneID:
120649774
NCBI-ProteinID:
XP_039782590
LinkDB
All DBs
Position
9K:complement(7333405..7343380)
Genome browser
AA seq
1563 aa
AA seq
DB search
MGTPVNIIVGSHVWLEDPSEAWVDGVVTEIKGRDATIATTNGKTVVASLGSIYPKDTEAP
PSGVDDMTKLAYLHEPGVLHNLSCRYGLNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQY
KGATFGELSPHLFAIADACYRALINDHGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKYGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCNAPPEDVKRFKVGDPRSFHYLNQTNCYEVANVDDAREYI
ETRNAMDIVGIDQDEQDAIFRVVAAILHLGNIDFSKGKEIDSSKLRDDKSVHHLKTVAEL
LMCDEKALEDSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINNSI
GQDPDATNIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEID
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKL
ARTAFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNSSRCPFVANLFPPLPEETSKQS
KFSSIGARFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFIDRFGMLAPELVDSSDEKAACAAICDRMGLKGYQIGKTKVFLRA
GQMAELDARRAEVLANAARLIQRRIKTHLMRKEFVNLRKASVQSQKFWRARLARKLFEYM
RRDAASIRIQKHARSHSARKVYRQVYESAIVIQTGLRAMAARNEHRFRRETKASIIIQTR
WRQHKAYVAYKQQKRASLILQCLWRARVARKELRKLRMEARETGALKEAKDKLEKRVEEL
TWRLDVEKRLRTDLEEAKGQEIGKLQSALQEMQEKIEEAHAAVVKEKEAAKLAIEQAPPK
IVEVPVVDTEKVEQLTSKNKELEDELSTFRQKAEDLENKLLEMQKRSDELSQETQERESK
VNQLQEMIERLETSLSNMESENQVLRQQSLVVATADEDKSKQIERLESKIAILESEIQLL
HSNSALAVQAVVTPAMNQTSVMENLIHKEIDNGHQLEEAKIVNEHVVVPPVKNLSKQKSL
TDRQQENHDALIKSLVEDRRFDDKKSAAACIVYKSLLHWRSFEAEKTNIFDRIIQTIRSS
VEGAESSGELAYWLSTTSTLLYLLQNTLKASSSSSKGSNRSRTATGSLFSRMVLSARTSS
SGLGITSGYGGMVGRPDTASMVEAKYPALRFKQQLTAYVEKIYGIIRDNLKKEISPFLTL
CIQAPRANRVRPSRGSLKSIHSNALSRQASSVHWQSIVKCLDNTLETMKNNHVPPMIIKK
TFSQVYAYLNVQLFNSLLLRRECCSFSNGEFLKAGLQELEQWCSRTTEEYAGASWDELQH
IRQAVGSLVLHQKSHKTLEEITNELCPILSITQIYRIATMFWDDKYGAQGLSQEVIGKMR
TMTTDDTITTPNSSFLLDDDSSIPISLDDIAHLMLDIDPIDVEPPPLLRQNSQFHFLLQQ
HTD
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggggacaccggtgaacatcatcgtcggctcgcacgtgtggctggaggaccccagcgaa
gcctgggtcgacggcgtcgtcaccgagatcaaaggccgcgacgccaccatcgccaccacc
aatggcaaaacggttgtggcgagccttgggagcatataccccaaggacacggaggcgccg
ccttcgggagtggacgacatgacgaagctggcgtacctccacgagccaggggtcctgcac
aacctctcttgccggtacggccttaacgagatatacacctacaccgggaacatcttgatt
gcggtgaaccctttccagagactgcctcatctgtatgacgttcacatgatggagcagtac
aagggcgccacctttggggagctcagcccccatctctttgcgatcgcagatgcctgttac
agggcgctgatcaatgatcacgggagccagtccatcttggtgagtggtgagagtggtgct
ggtaagacggaaacgacgaagatgctcatgaggtaccttgcattcatgggaggaaggtct
ggtacggaggggcgtactgttgagcaacaggttctagagtctaacccagtactggaagca
tttggtaatgcgaagacagtaaagaacaataactcaagtcgctttggaaagtttgttgaa
attcaattcgacaagtatgggaagatatctggggctgctgttcgcacatatctccttgaa
cgatcacgagtatgtcaggtctctgatcctgagaggaactaccattgcttttacatgctt
tgtaacgcaccccctgaggatgtaaaaagatttaaggtgggagacccaagatcattccat
tacttaaaccaaacgaactgctatgaagtagcaaatgtggatgatgcaagagaatacata
gaaaccagaaatgcaatggatattgttggcattgatcaagatgaacaggatgcaatcttc
agagtagtagcggcaatccttcacttagggaatattgacttctccaaagggaaggaaatt
gattcatccaagttgagagatgataaatcagtccatcacctgaaaacagtcgcagaactg
cttatgtgtgacgagaaggcccttgaagactccctttgccagcgagtcattgtaacacct
gatggaaatatcacgaaacccctcgatccagattctgctgcattaagccgtgatgcctta
gcaaagacggtatattcaagattgtttgactggattgtagacaagatcaataactcaatt
ggtcaggatccagacgcgaccaatataataggtgtgcttgatatctatggattcgagagc
ttcaagattaacagttttgagcagctatgtatcaatttgacaaacgagaagttgcagcag
cacttcaaccagcatgtgtttaagatggagcaagaggaatacacaagggaggaaatagac
tggagctatgttgaatttgtagacaatcaggatgtgctggacctgattgagaagaaacct
ggaggaataattgctcttctggatgaggcatgcatgtttccaaagtccacgcatgaaaca
tttgcccaaaagatgtaccaaacatacaaggcacataagcgcttcagcaagcccaaactt
gctcgcaccgcctttacaatcaaccactacgcaggagatgtcacatatcaagcagatcag
ttccttgataaaaacaaagactatgtggtagctgaacaccaagctctactaaattcttca
aggtgcccttttgttgcaaatctctttcctccattacctgaggagacttctaaacagtcc
aaattctcttcaatcggtgctcgctttaagcaacaacttcaatccctcatggaaacactg
agtacaacagaacctcactacattagatgtgtgaagcctaatactgtactgaaaccaggc
atctttgagaatttcaacgtcttgaatcaattgagatgtgggggtgttctggaagcaatc
aggatcagctgtgctggctatccaacaaagaggacatttgatgagttcattgatcggttt
ggaatgcttgcaccagagcttgtggacagctctgatgagaaggccgcctgtgcagcaata
tgtgatagaatgggtttgaaaggatatcagatagggaaaacaaaggtattcttaagagct
ggtcagatggcagagttggatgctcgaagagcagaagtattggccaatgctgcgcgacta
atccagaggcgtataaagacacatcttatgcgaaaggaatttgtcaacttacgaaaagcc
tcagttcaatctcagaagttctggagagcacgactagctagaaagctttttgagtatatg
agaagagatgctgcttcaattaggatacaaaagcatgcacgtagccattctgccagaaaa
gtgtaccgtcaagtatatgaatcagctatagtaatacagacaggactacgggcaatggca
gctcgcaatgaacacaggttccgaagagagaccaaggcttccataattatccagactcga
tggcgccaacacaaagcttatgttgcttataagcagcaaaagagagcttcattgattctt
cagtgcttgtggagggcacgtgtcgcaagaaaggaacttcggaaactgagaatggaagca
agagagactggcgcactcaaagaagctaaagacaagcttgaaaagagagtagaagaactt
acatggcggttagatgttgaaaagcgtttgaggactgaccttgaagaagccaagggccaa
gaaattggaaagttgcaatctgctttgcaagaaatgcaagaaaagattgaggaagcccat
gcagcagtggtaaaggagaaagaagccgcgaagttagcaattgaacaggcaccaccaaag
atagtagaagtgccagttgtggacactgaaaaagttgagcagttgacaagtaaaaataaa
gaacttgaggatgaactaagtacatttagacagaaggctgaagatcttgaaaataagctt
cttgagatgcaaaaacggtctgatgaattgtcacaggagacacaagaacgagaatccaaa
gttaatcaacttcaagagatgatcgaaaggctagaaacaagtttatccaatatggaatct
gaaaaccaggttctacggcaacaatctttggtcgttgcaacagcagatgaggataaatca
aaacagatagagagactggaaagcaagattgccatcttggagtcggagatccagttgctc
cacagtaattcggcgcttgctgttcaggccgtggtcacccctgcaatgaatcagacatca
gtaatggagaacctcattcataaggaaattgacaatggacaccagcttgaagaagctaaa
atagtcaatgagcatgtggttgttcctcctgtaaagaatctaagcaaacaaaaatcactg
acggatcgacaacaagaaaatcatgatgccctgattaaaagtctggtagaagacaggaga
tttgatgacaaaaaatcagctgcagcatgcattgtctacaaatcactcctgcactggcgt
tcatttgaagcagagaagactaacatatttgatcgaatcatccaaacaattaggtcatca
gttgagggtgctgaaagttctggagagctagcttattggttgtcaactacatcaactctc
ctctacttattacaaaataccctcaaagctagtagttcatcgagtaaaggatcgaatcgc
agccggactgcaacaggcagcctgtttagtagaatggtgctgagtgcccggacatcatca
tcaggattaggcataactagtggatatggtggaatggtaggaaggcctgacactgcatca
atggtagaagcaaagtatccagcacttcggttcaagcaacagttaacagcatacgttgag
aagatatatgggataattagagataacctgaagaaagaaataagcccattcttgactcta
tgcatacaggctccaagagctaatcgtgtgagaccatctcgtggttcactaaaaagtata
cactctaatgcactatcaaggcaagcatcaagtgtacattggcaaagcatagttaagtgc
ctggataatacactggaaacaatgaaaaataaccatgtacctccgatgataataaagaaa
acatttagtcaagtatatgcatacttgaatgtgcaactcttcaatagtttgctacttcgt
cgggaatgctgctcatttagcaatggggaattcttaaaggctggcttacaagaactggag
caatggtgctctagaacaactgaagagtatgcaggggcatcttgggatgaactgcaacac
ataaggcaggcagttgggtccctggttctgcatcagaagtcacacaaaaccctggaggaa
atcacgaatgagctttgccctattttgagcataactcaaatatatcgcatagcaacaatg
ttctgggacgacaaatatggtgcacaaggtctatctcaagaggtcattggaaagatgaga
acgatgacaacagatgacacgataactactccaaatagttctttcctgctagatgatgat
tcaagcatacctatatccttggacgatatagcacatctgatgcttgacatcgacccaata
gatgtggaaccgccgccactactgaggcaaaactcgcagtttcacttccttctgcagcag
cacacagactga
DBGET
integrated database retrieval system
