Panicum virgatum (switchgrass): 120649793
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Entry
120649793 CDS
T07260
Name
(RefSeq) heat stress transcription factor A-2a-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120649793
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120649793
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GFIT
Motif
Pfam:
HSF_DNA-bind
At4g38062_C
PMD1-like
SKA2
DUF4763
APG6_N
Motif
Other DBs
NCBI-GeneID:
120649793
NCBI-ProteinID:
XP_039782617
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Position
9K:7454578..7456507
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AA seq
370 aa
AA seq
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MDPFHGIVKEEEFDFDFDFTGASAAGAPAAGASSSSSWAVGVPELPRPMEGLGEVGPTPF
LTKTYDVVDDPNTDTVISWGFAGHSFVVWDANAFANVILPRYFKHSNFSSFVRQLNTYGF
RKVDPDRWEFANEGFLRGKRELLKTIKRRRPPSSPSAQQGQGQPPAACLEVGQFGLDGEV
QRLQRDKGILLAEVVKLRHEQQATRAQMQAMEERITTAEQKQQQMTVFLARAMKNPSFLR
MLVDRQGLAGRRRELEDALSKKRRRPIEYLPRDGESSSSSAAAEAAVGDYISDLPVGVNG
VAEPDDDEGRRDDIVGGGGKDTESFWVELLNLGLEEKDREGGGAGVDNDVEVLVQSIYHL
NPNPGSPSGK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatcccttccacggcattgtgaaggaggaagagtttgacttcgatttcgacttcacc
ggcgcttcggcggcgggcgctccggcagcgggggcgtcgtcgtcgtcctcctgggctgtt
ggcgtgccggagctgccccggccgatggaagggctcggcgaggtggggcctactccgttc
ctgaccaagacctacgacgtcgtggacgaccccaacaccgacaccgtcatctcctggggg
ttcgccggccacagcttcgtcgtctgggatgccaacgccttcgccaacgttatcctcccg
cgctatttcaagcacagtaacttctccagcttcgtccgccagctcaacacatacgggttc
aggaaggttgatccggacaggtgggagttcgctaacgagggcttcctccggggcaagagg
gagctcctcaagacgatcaagcgccggcgcccgccgtcgagcccgtcggcgcagcagggg
caggggcagccgccggcagcgtgcctggaggtggggcagttcgggctcgacggcgaggtg
caacggctgcagcgcgataaggggatcctgctcgcggaggtggtgaagctgcggcacgag
cagcaggcgacgcgcgcgcagatgcaggccatggaggagcggatcaccacggcggagcag
aagcagcagcagatgacggtgttcctggcgcgcgccatgaagaacccgagcttcctccgg
atgctggtcgaccgccaggggctggccggccgccggagggagctcgaggacgcgctctcc
aagaaacgccgccggcccatcgagtacctcccacgcgacggcgagagcagcagcagcagc
gccgccgcggaggcggcggtgggcgactacatttccgacctcccggtcggcgtgaacggc
gtggctgagccagacgacgacgagggccggcgggacgacatcgtcggcggcggcgggaag
gacacggagagcttctgggtggagctgctgaacctcggcctggaggagaaggaccgggag
ggcggcggcgccggcgtggacaacgacgtggaagtgctcgtgcagagcatctaccacctg
aacccgaacccggggagccccagcggcaagtga
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