KEGG   Panicum virgatum (switchgrass): 120649829
Entry
120649829         CDS       T07260                                 
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00260  Glycine, serine and threonine metabolism
pvir00460  Cyanoamino acid metabolism
pvir00630  Glyoxylate and dicarboxylate metabolism
pvir00670  One carbon pool by folate
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
pvir01230  Biosynthesis of amino acids
pvir01240  Biosynthesis of cofactors
pvir04981  Folate transport and metabolism
Module
pvir_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    120649829
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    120649829
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    120649829
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    120649829
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    120649829
Enzymes [BR:pvir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     120649829
SSDB
Motif
Pfam: SHMT Aminotran_1_2
Other DBs
NCBI-GeneID: 120649829
NCBI-ProteinID: XP_039782662
LinkDB
Position
9K:complement(7914334..7918995)
AA seq 514 aa
MAMATALRKLSANALRRQPLPRITPLYYMASLPATEERSGITWPKQLNAPLQEVDPEIAD
IIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL
CQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQT
DTKKISATSIFFETMPYRLDESTGLIDYDQLEKSAVLFRPKLIIAGASAYARLYDYDRMR
KICNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKE
INKQGKEVMYDFEDKINAAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVISNSA
KFAQSLVAKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLETVHIAANKNTVPGDVSAM
VPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLAVKIKAATTGGTKLKDFVATLQSDS
KIQAEIAKLRIDVEEFAKQFPTIGFEKETMKYKN
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggccatggcgacggcgctccgcaagctctccgccaacgcgctccgccgccagcctctc
cctcgcatcacgccgctctactacatggcgtccctgccggcgacggaggagagatccggt
attacctggccaaagcagttgaacgcgccgcttcaagaggtcgaccccgagattgctgac
atcatcgagctcgagaaggcccgccaatggaaggggctggaactcatcccgtcggagaat
ttcacgtcggtgtcagtgatgcaggctgtgggttccgtcatgaccaacaagtacagcgag
gggtaccccggcgcaagatactacggtgggaatgaatacattgatatggccgaatccttg
tgtcagaaacgtgctttggaggctttccgcttggacccagcgaagtggggagtgaatgtg
caacctctatcgggttcacctgccaacttccaggtgtacaccgcgctattgaagccacat
gaaaggatcatggctttggatcttccacatggtggacatctttctcatggttaccagact
gacactaagaagatttcggcaacttcgatattctttgagacgatgccctacagattggat
gaaagcactggattaattgattacgatcagttggagaaaagcgctgttcttttcaggcca
aagttgatcatagctggtgcaagtgcatatgctcgcctatatgattatgaccgtatgcgg
aagatatgcaacaagcagaaagcaatacttctagcagacatggcgcatatcagtgggctg
gtcgcagctggcgtcattccatctccttttgattatgcagatgtagtgactaccactact
cacaagtcacttcgtgggccacgtggagccatgatcttttacaggaagggagttaaagaa
ataaataagcaaggaaaagaggttatgtatgattttgaggacaagatcaacgctgccgtc
tttccaggtctgcaaggtggtcctcataaccacaccattactggcttagctgttgcgctt
aagcaggcaactactccagagtaccgagcttatcaagagcaagttatcagcaacagtgct
aagtttgcacagagcttggtagcaaaaggatacgagcttgtctctggtggaactgataac
catttggtccttgttaacctcaagaataaggggatagatggttcaagggtggagaaggtt
ttagaaactgtgcatattgcagcaaacaagaacactgttcctggtgatgtttcagctatg
gtaccaggaggcatcaggatgggaaccccagctcttacatccagaggatttgtggaggaa
gatttcgctaaggttgctgacttctttgatgcagcagtgaacttggctgtgaagattaag
gctgcaacgacaggtggaacgaagctgaaggactttgttgccaccttgcaatctgatagc
aaaatccaagctgagattgcaaagcttcgcattgatgtggaggaatttgcaaaacagttt
ccaacaattggatttgagaaagagaccatgaaatacaagaactaa

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