KEGG   Panicum virgatum (switchgrass): 120649833
Entry
120649833         CDS       T07260                                 
Name
(RefSeq) telomerase Cajal body protein 1-like
  KO
K23314  telomerase Cajal body protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120649833
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120649833
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    120649833
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     120649833
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR11_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 120649833
NCBI-ProteinID: XP_039782667
LinkDB
Position
9K:complement(7960771..7964546)
AA seq 414 aa
MAAAEEEAAAAPPDGGAESEPAEMSAAGEEREEAAEYSWPQLHFDRPPRRLYHFARQFRS
VAPAAGSGSGENFLKGVKWSPDGSSFLTSSDDNSLRLFYLPEDAYSGAEHVAEAAVGGED
SYGAFLQVNEGVPVYDFCWYPCMSLSEPATCVFASTSRDHPIHLWDATSGELRCTYRAYD
AMDEIAAALSISFNSAGSKLFAGYNKAIRVFDVHRPGRDFEQYSLLKGGEGPTGIISSIS
FSPHNGMLAVGSYSQTTAVYAESNMEPLYVLHGQLGGVTQVLFSKDGNYLYTGGRKDPYI
LCWDIRNTVDIVYKLYRSADTTNQRIYFDIEPCGRHLATGGQDGMVHVYDLQGGQWVTGF
QAAGDTVNGFSFHPYLPFAVTSSGHRRFGMQDELNLGGDENCCSVWVFSSSQES
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcagcggcggaggaggaagcagctgccgcgccgcccgacggcggcgccgagagcgag
cctgcggagatgtctgcggcgggggaggagagagaggaggcggcggagtactcgtggccc
cagctccacttcgaccgcccgccccgccggctctaccacttcgcccgccagttccgctcc
gtcgctcccgctgccggcagcggaagcggcgagaacttcctcaaaggcgtcaaatggtcg
cccgacggctcctccttcctcaccagctcggacgacaactccctccgcttgttctaccta
ccggaagacgcgtacagtggggcggagcacgttgccgaggccgctgtcggaggtgaagat
tcttatggcgcgttccttcaggtgaacgagggtgtaccagtgtacgatttctgctggtac
ccgtgtatgtctttgtctgaaccagccacctgtgtatttgcaagcaccagtcgtgatcac
ccaatacacctttgggatgcgaccagtggggagctccggtgcacctacagagcatatgat
gccatggatgaaatagctgctgcgctttcaatctctttcaattctgctggatctaagctc
tttgctggatacaacaaagcaataagagtatttgatgttcatcggcctggtagagatttt
gagcagtattctttacttaaggggggtgaagggccaaccggtataatatcttcaatttcc
ttctctccgcacaatgggatgcttgctgtcggctcatacagccagacaactgctgtgtat
gcagaaagtaatatggagcctttgtatgtcttacatggccagcttggcggtgtcacacag
gtgcttttttcgaaagatgggaactatctatataccggagggcgcaaggatccatacata
ttatgttgggatattcgcaatactgtggatattgtttacaagttgtacagatcagctgat
actactaatcaaagaatatatttcgatattgagccctgcggtagacatctagccactggt
gggcaggatgggatggtacatgtctatgaccttcaaggtggtcaatgggtaacaggtttc
caagcggctggtgatactgtaaacgggttctcgttccatccataccttccatttgccgtc
acatcatccgggcacaggagatttggcatgcaagatgagttaaacttgggaggtgatgag
aactgctgctctgtctgggtgttttcttcatcacaagaatcttaa

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