Panicum virgatum (switchgrass): 120649936
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Entry
120649936 CDS
T07260
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120649936
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120649936
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120649936
NCBI-ProteinID:
XP_039782802
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Position
9K:complement(9202369..9209085)
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AA seq
858 aa
AA seq
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MMEGVVVAMPNGVKAEVAPAAATADSPKSVLEDEKISDPNNGNASIATEPTKQVEESSDD
FVDASSSLPVDLEIDSASVHPVKKEEQLLEPVREEEVDGFVDESISMPIDLEAKNGDASL
ITEAMKKEEEQLEEARVKAEEEEETRKREEAARLAFDPETRYSKLDELLTKTQLFSEFLL
QKMDQIADEVVEPQAEEPPAAEKKKGRGRKRKAKAVPQYNDKKAKTAVAAMLTRSREERL
ANDCTLPEEERWKNEQANLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKT
IQTIGFLAHLKGKGMHGPYMVIAPLSTLSNWVNEISRFVPSVTSIIYHGDKVARAEIRRK
FMPKTKDAVSPDFPIVVTSYEMAMSDAIFLAHYKWKYVVVDEGHRLKNSKCKLLREIKRI
PMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSGKASEEKEPEENRRV
HVVSKLHAILRPFLLRRMKEDVEQMLPRKKEIIIYANMTELQKRIQDHLVEKTFDVYLNK
ETDIVLRRPGIKAKLNSLFIQLRKNCSHPDLLEAAFGTTSLYPPVDKLLEQCGKFQLLDR
LLTKLLARKHKVLIFSQWTKVLDIIEYYLDSKGLDVCRIDGGVKLEERRRQIAEFNDLNS
NLNVFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATS
HSVEVLFNDLYLQISCLGLLLGLLSFSSLQGRIIKKAFGKLKLEHVVIGRGQFEQERAKP
NVLEEGELLALLRDEQAEEDKMIQTDISNEDLLKLMDRSDLSGPPGAADAAPLIPLKGPG
WEVVVPTKSGGMLAALTS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggggtggtagtcgccatgccgaacggggtgaaagcggaagtcgcccccgcc
gctgccacggcagattctcctaaatccgttctggaggacgagaaaatttctgaccccaac
aacgggaacgcctccattgccactgagccaactaagcaagtggaggagagctcggatgat
tttgtggatgcaagctcgtccctgcctgttgaccttgaaattgatagtgctagtgtgcac
cctgttaagaaggaagagcagcttctggagcccgtcagggaggaggaagttgatggtttc
gttgatgaaagtatatctatgcctattgaccttgaggccaagaatggcgatgcatccctg
atcacagaagcaatgaagaaggaagaggagcagcttgaggaggcgcgggttaaggcagag
gaagaagaggaaaccaggaagagggaagaagctgcaagacttgcttttgatcctgagaca
cggtatagcaagttagatgagttgctgacgaagacacagctcttttcggagtttttactt
cagaaaatggatcaaatcgctgatgaagttgttgaacctcaagctgaagagccaccagca
gcagaaaagaagaaaggacgtggccggaagaggaaagctaaagctgtgccccaatacaat
gataaaaaggctaagacggcagtggcagccatgcttacaagatctcgtgaagaacgcctt
gctaacgattgtactctcccagaagaagaaaggtggaaaaatgagcaagccaatcttgtg
cctttaatgactggtgggaagttgaagtcataccagataaagggtgtgaagtggctaatt
tcattgtggcagaatgggctcaatgggatactggctgaccagatgggccttgggaaaaca
atccaaacaattggatttcttgctcatctgaaagggaaaggaatgcacggtccatacatg
gtaatcgctcctttgtccactctctcaaactgggtcaatgagatctcaaggtttgttcca
tctgttactagtatcatttatcatggagataaagtggccagggctgagataagaagaaaa
ttcatgcctaaaacgaaagatgctgttagccctgattttccgatagtagtgacttcatat
gagatggccatgtcagatgcgatatttcttgctcactataagtggaagtatgttgttgtg
gatgaggggcatcgtttgaaaaattctaagtgtaaattgttaagggagataaagcgcatt
ccgatggataataagctccttttgactgggacaccccttcagaacaatcttgcagagctg
tggtccctcctgaacttcattttgcctgatatattctcatcacaccaggaatttgaatca
tggtttgatttttctggaaaagcaagtgaagaaaaagaacctgaggagaataggagggtt
catgttgtttcaaagcttcatgccattttgcgtccattccttcttaggcggatgaaagag
gatgtagagcagatgcttccacgaaagaaagagataatcatttatgctaacatgaccgaa
cttcagaagcgaatccaggatcacttagttgagaaaacatttgatgtctacttgaacaaa
gaaacagatattgtgttgaggagacctggcattaaggcaaagctaaatagtctctttatt
caactaaggaagaattgcagtcatcctgatcttttggaagctgcatttggaacaacaagc
ctgtatccacctgttgataagcttctagagcaatgtggcaaatttcagcttctggacaga
ttactaactaagctactcgcacgaaagcacaaggttctaatattttcacaatggacaaaa
gttttggacattattgagtattacctagattcaaaaggcctcgacgtttgcagaattgat
ggtggtgttaagttagaagagagaaggaggcagatagcagaatttaatgacttgaatagc
aatctgaacgtctttattctgagcacacgggctggtgggcttggtatcaaccttacttct
gctgatacttgtatcttatatgacagcgactggaatcctcagatggatcttcaggccatg
gatagatgccaccggattggtcagacacgcccagtgcatgtttataggctggcaacatca
cattctgttgaggtacttttcaatgatctgtatcttcagattagttgcttgggcctactc
ttaggtttactcagcttttcatcattgcaggggcggatcatcaagaaagcttttgggaag
ttgaaactggagcacgtggtgatagggaggggacagtttgaacaagagagagcaaagcct
aacgtcttagaggaaggggagctgctggcgctgctcagggacgagcaggccgaggaagac
aagatgatccagactgacatcagcaacgaagatctcttgaagctgatggaccggagcgac
ctgtctgggccgcctggtgctgccgacgccgcaccactgatccctctgaaaggccctggc
tgggaggtcgtggtgcccacgaagagtggaggcatgctcgcggcgctcaccagctga
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